Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0322
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical pr... 105 5e-23
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 37 0.019
Z83218-5|CAB05691.1| 352|Caenorhabditis elegans Hypothetical pr... 32 0.54
AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical ... 30 1.6
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 30 2.2
Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical pr... 29 3.8
U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein. 29 3.8
L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage stimul... 29 3.8
AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical ... 29 3.8
AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm rec... 29 3.8
Z82055-2|CAB04844.1| 369|Caenorhabditis elegans Hypothetical pr... 29 5.0
U55369-7|AAK52176.2| 358|Caenorhabditis elegans Hypothetical pr... 29 5.0
U55369-6|ABO16439.1| 476|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 28 8.8
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 28 8.8
>U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical
protein C50F2.3 protein.
Length = 855
Score = 105 bits (251), Expect = 5e-23
Identities = 63/177 (35%), Positives = 104/177 (58%), Gaps = 1/177 (0%)
Frame = +3
Query: 255 IRHENYEQALKLMQRATVLPSRKVAYHDDSETVQMRLYKSLKVWSMYADLEESFGTFKSC 434
++H+ + AL +MQRA V+P K +++ ++VQ R+++S +W+MYAD EE GT +SC
Sbjct: 450 MKHKRAKAALTVMQRACVVP--KPGDYENMQSVQARVHRSPILWAMYADYEECCGTVESC 507
Query: 435 KAVYDHIIDLKIATPQIIINYGLFLKSIITLKKLLE-HMKRVLPYSSGLMCMIFGIHI*Q 611
+ VYD +I+L++A+PQ+I+NY +FL+ + + + K + + + I+ ++
Sbjct: 508 RKVYDKMIELRVASPQMIMNYAMFLEENEYFELAFQAYEKGIALFKWPGVFDIWNTYL-V 566
Query: 612 NF*KDMVVPKLERARDLFEPCLGALSHGICKVYFLNYMPNWKKSWVSLTCLSVYERA 782
F K KLERARDLFE CL K FL Y ++ ++ LS+Y RA
Sbjct: 567 KFIKRYGGKKLERARDLFEQCLENCPPTHAKYIFLLYAKLEEEHGLARHALSIYNRA 623
Score = 95.9 bits (228), Expect = 3e-20
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 500 IIFEEHNYFEEAFRAYEKGIALFKWPNVYDIWNTYLTKFLKRYGGSKT*KSQRFI*AMSW 679
+ EE+ YFE AF+AYEKGIALFKWP V+DIWNTYL KF+KRYGG K +++
Sbjct: 530 MFLEENEYFELAFQAYEKGIALFKWPGVFDIWNTYLVKFIKRYGGKKLERARDLFEQCLE 589
Query: 680 SLVPWNLQSLFS*LYAKLEEELG 748
+ P + + +F LYAKLEEE G
Sbjct: 590 NCPPTHAKYIFL-LYAKLEEEHG 611
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/89 (47%), Positives = 60/89 (67%)
Frame = +1
Query: 1 EWHKRVKLYEGKPHEIIDTYTEAVQTVDPKLAVGKLFTLWVGFAKFYENNDQIEDARLIF 180
EW RV +YEG ++ I+T+ EAV++V+PK+ VGK+ LW+G AK YE+N ++ AR F
Sbjct: 365 EWLNRVNIYEGNYNKQIETFKEAVKSVNPKIQVGKVRDLWIGLAKLYEDNGDLDAARKTF 424
Query: 181 EKATQVAYVKVDDLASVWCEWAEMESDMK 267
E A + V +LA+VWC +AEME K
Sbjct: 425 ETAVISQFGGVSELANVWCAYAEMEMKHK 453
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +2
Query: 464 KNCYSTNYYQLWIIF----EEHNYFEEAFRAYEKGIALFKWPNVYDIWNTYLTKFLKRYG 631
+NC T+ +++++ EEH A Y + + +++ ++N Y+ K + YG
Sbjct: 589 ENCPPTHAKYIFLLYAKLEEEHGLARHALSIYNRACSGVDRADMHSMYNIYIKKVQEMYG 648
Query: 632 GSKT*KSQRFI*AMSWSLVPWNLQSLFS*LYAKLEEELG 748
++ R I + S +P + S YA+LE +G
Sbjct: 649 IAQC----RPIFERAISELPEDKSRAMSLRYAQLETTVG 683
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 118 WVGFAKFYENNDQIEDARLIFEKATQVAYVKVDDLASVWCEWAEMESDMK 267
W+ + K+ E+ +I+ AR +FE+A V + + S+W ++AEME K
Sbjct: 89 WIKYGKWEESIGEIQRARSVFERALDVDHRSI----SIWLQYAEMEMRCK 134
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 118 WVGFAKFYENNDQIEDARLIFEKATQ 195
W+ +AKF E N I +AR +EKA +
Sbjct: 224 WIKYAKFEERNGYIGNARAAYEKAME 249
>Z83218-5|CAB05691.1| 352|Caenorhabditis elegans Hypothetical
protein C31A11.9 protein.
Length = 352
Score = 31.9 bits (69), Expect = 0.54
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 390 WTKPLVIYTTSFAQFQNHHDMLLFCLVKQWLFALIL 283
W + I+++S +QFQN H L + LV Q + + L
Sbjct: 229 WRRMHAIFSSSSSQFQNIHSQLFYALVAQTMIPVFL 264
>AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical
protein C24G6.6 protein.
Length = 527
Score = 30.3 bits (65), Expect = 1.6
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 5/137 (3%)
Frame = +3
Query: 375 LKVWSMYADLEESFGTFK-SCKAVYDHIIDLKIATPQIIINYGLFLKSII----TLKKLL 539
LK W+ Y ESF T K KA+ D D+ P+ N+ +++I T K L
Sbjct: 214 LKEWNDYGPECESFATNKIGFKAILD---DIAAPIPRKAFNFNSRVENINLDSNTGKIKL 270
Query: 540 EHMKRVLPYSSGLMCMIFGIHI*QNF*KDMVVPKLERARDLFEPCLGALSHGICKVYFLN 719
R +P + + + + + + M P L R + +G G CKV+F
Sbjct: 271 TVSDRAVPTEYDYIIVTSSLGVLKKYHHKMFTPPLPRQKIEAIEKIGF--GGSCKVFFEW 328
Query: 720 YMPNWKKSWVSLTCLSV 770
P W + S+ L V
Sbjct: 329 ETPFWSNNTYSIAPLPV 345
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 179 KINLASSIWSLFS*NFANPTHSVKSLPTANLGSTVCTASVY 57
K +S I +FS F NP S+K+L TA + + + ++Y
Sbjct: 57 KFQASSHIGQIFSVRFINPDGSLKALLTAGIAAGILQINLY 97
>Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical
protein F28C6.6 protein.
Length = 735
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = +3
Query: 291 MQRATVLPSRKVAYHDDSETVQMRLYKSLKVWSMYADLEESFGTFKSCKAVYDHIIDLKI 470
++ A VL ++ ++ + T M+ K L + YAD +E F++ K +YD ++ ++
Sbjct: 302 VKMAQVLKLETISLYERAITGLMKESKLL--YFAYADFQEEHKQFEAVKNIYDRLLGIEH 359
Query: 471 ATPQI 485
P +
Sbjct: 360 INPTL 364
>U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = +3
Query: 291 MQRATVLPSRKVAYHDDSETVQMRLYKSLKVWSMYADLEESFGTFKSCKAVYDHIIDLKI 470
++ A VL ++ ++ + T M+ K L + YAD +E F++ K +YD ++ ++
Sbjct: 297 VKMAQVLKLETISLYERAITGLMKESKLL--YFAYADFQEEHKQFEAVKNIYDRLLGIEH 354
Query: 471 ATPQI 485
P +
Sbjct: 355 INPTL 359
>L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage
stimulation factor protein.
Length = 735
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = +3
Query: 291 MQRATVLPSRKVAYHDDSETVQMRLYKSLKVWSMYADLEESFGTFKSCKAVYDHIIDLKI 470
++ A VL ++ ++ + T M+ K L + YAD +E F++ K +YD ++ ++
Sbjct: 302 VKMAQVLKLETISLYERAITGLMKESKLL--YFAYADFQEEHKQFEAVKNIYDRLLGIEH 359
Query: 471 ATPQI 485
P +
Sbjct: 360 INPTL 364
>AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical
protein Y73C8C.3 protein.
Length = 826
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 506 FEEHNYFEEAFRAYEKGIALFKWPNVYDIWNTYLTKFLKRY 628
FE H +E F A+EK F+ VYD L KF++++
Sbjct: 187 FENHT-IDELFIAFEKLFPSFEDERVYDSLKAVLRKFVEKF 226
>AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm
receptor protein 211 protein.
Length = 349
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 390 WTKPLVIYTTSFAQFQNHHDMLLFCLVKQWLFALIL 283
W + I+++S FQN H L + LV Q + + L
Sbjct: 229 WLRMDAIFSSSSTHFQNLHSQLFYALVAQAMIPIFL 264
>Z82055-2|CAB04844.1| 369|Caenorhabditis elegans Hypothetical
protein T26H2.2 protein.
Length = 369
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 107 SLPTANLGSTVCTASVYVSIISWGLPSYNLTL 12
SL N+ TV V ++ SW LPS+ LTL
Sbjct: 73 SLEIENVNVTVTEKEVELNFESWHLPSFQLTL 104
>U55369-7|AAK52176.2| 358|Caenorhabditis elegans Hypothetical
protein C18C4.1a protein.
Length = 358
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 746 PALLPIWHIIKKIDFANSMGQGSKTWLK*ISGSFKFWNHHIFLKILLDM 600
P + PIW K+I+ G+G +TW I F F +H L+ L+M
Sbjct: 73 PQVRPIWGFGKRIE-----GRGDETWKPEIVEDFYFRHHCASLQAALNM 116
>U55369-6|ABO16439.1| 476|Caenorhabditis elegans Hypothetical
protein C18C4.1b protein.
Length = 476
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 746 PALLPIWHIIKKIDFANSMGQGSKTWLK*ISGSFKFWNHHIFLKILLDM 600
P + PIW K+I+ G+G +TW I F F +H L+ L+M
Sbjct: 112 PQVRPIWGFGKRIE-----GRGDETWKPEIVEDFYFRHHCASLQAALNM 155
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 133 KFYENNDQIEDARLIFEKATQ 195
+++E ++EDA L+F+KATQ
Sbjct: 152 QYFETYGKVEDAMLMFDKATQ 172
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 133 KFYENNDQIEDARLIFEKATQ 195
+++E ++EDA L+F+KATQ
Sbjct: 152 QYFETYGKVEDAMLMFDKATQ 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,791,781
Number of Sequences: 27780
Number of extensions: 416121
Number of successful extensions: 1170
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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