Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0322
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       24   1.9  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    22   5.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   7.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   7.5  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    21   9.9  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    21   9.9  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   9.9  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 509 EEHNYFEEAFRAYEKGIALFKWPNVYDIWN 598
           ++ +YF+E  R+Y KG       N  D W+
Sbjct: 15  KDESYFDEGGRSYGKGRGFIIQNNNNDDWS 44


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 551 KGIALFKWPNVYDIWNTYLTKFLKRYGGSK 640
           + I + K  +++D  +TY+ K   +  GSK
Sbjct: 308 RAIVIEKGQSIWDYDSTYIPKVKNKKAGSK 337


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 773 IYRQAGQANPALLPIWHIIKKIDFANSMGQG 681
           +Y+   Q  P   PI+ I  +ID     G+G
Sbjct: 49  VYKVVDQTGPTHAPIFTIAVQIDGQTYEGKG 79


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 206 TYATCVAFSKINLASSIWSL 147
           T    +AF K   AS +WS+
Sbjct: 805 TAPEAIAFRKFTSASDVWSM 824


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 592 LEYISNKIFKKIWWFQNLKEPEIYL 666
           LE I ++I KK   FQ+ +  ++YL
Sbjct: 123 LEEILDEIKKKTTRFQDSRSKDVYL 147


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 592 LEYISNKIFKKIWWFQNLKEPEIYL 666
           LE I ++I KK   FQ+ +  ++YL
Sbjct: 123 LEEILDEIKKKTTRFQDSRSKDVYL 147


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 592 LEYISNKIFKKIWWFQNLKEPEIYL 666
           LE I ++I KK   FQ+ +  ++YL
Sbjct: 123 LEEILDEIKKKTTRFQDSRSKDVYL 147


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,873
Number of Sequences: 438
Number of extensions: 5368
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)