Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0318
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           24   0.91 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   1.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.4  

>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 303 QEFKINSTHSHEVHHNEKEE 362
           Q  + N TH++E++H+ KEE
Sbjct: 33  QNTEHNYTHNNEMYHSVKEE 52


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 303 QEFKINSTHSHEVHHNEKEE 362
           Q  + N TH++E++H  KEE
Sbjct: 33  QNTEQNYTHNNEMYHRVKEE 52


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 303 QEFKINSTHSHEVHHNEKEE 362
           Q  + N TH++E++H  KEE
Sbjct: 33  QNTEQNYTHNNEMYHRVKEE 52


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +3

Query: 276 KQWVITNIAQEFKINSTHSHEVHHNEKEEVTGVGYSNEQFAITVGSFGTV 425
           ++W+ + +A    +   + H V  NE   +  +GY       TV   GT+
Sbjct: 618 RRWMPSTMANILDLLMDYEHTVKINENISMPYIGYQIILMIGTVIGPGTI 667


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +3

Query: 276  KQWVITNIAQEFKINSTHSHEVHHNEKEEVTGVGYSNEQFAITVGSFGTV 425
            ++W+ + +A    +   + H V  NE   +  +GY       TV   GT+
Sbjct: 851  RRWMPSTMANILDLLMDYEHTVKINENISMLYIGYQIILMIGTVIGPGTI 900


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +3

Query: 276  KQWVITNIAQEFKINSTHSHEVHHNEKEEVTGVGYSNEQFAITVGSFGTV 425
            ++W+ + +A    +   + H V  NE   +  +GY       TV   GT+
Sbjct: 851  RRWMPSTMANILDLLMDYEHTVKINENISMLYIGYQIILMIGTVIGPGTI 900


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 405 VGSFGTVVKWDLKSNVVKNYQHLL 476
           VG+F +V   DL    VKN Q L+
Sbjct: 443 VGTFNSVFICDLIEQKVKNIQMLV 466


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,466
Number of Sequences: 336
Number of extensions: 3612
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)