Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0318
         (629 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical pr...    33   0.22 
U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical pr...    33   0.22 
AL032629-1|CAA21557.1|  399|Caenorhabditis elegans Hypothetical ...    29   3.6  
AL032626-28|CAO82072.1|  337|Caenorhabditis elegans Hypothetical...    29   3.6  
AL032626-8|CAA21528.1|  335|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z66565-2|CAA91478.2|  502|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AC006684-12|AAN60497.1|  528|Caenorhabditis elegans Hypothetical...    28   6.3  
AC006684-11|AAF39968.1|  550|Caenorhabditis elegans Hypothetical...    28   6.3  
U80843-8|AAB37963.1|  250|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AF039040-4|AAB94182.1|  368|Caenorhabditis elegans Hypothetical ...    27   8.4  

>Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical protein
            ZK930.1 protein.
          Length = 1354

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
 Frame = +3

Query: 240  EMYPNGAADGTVKQWVITNIAQEFKINSTHSHEV---HHNEKEEVTGVGYSNEQFAITVG 410
            +++ +G+ DGTVK W   ++  E    S  S +        +E+V  VG+ N+QFA +  
Sbjct: 981  DLFLSGSTDGTVKVWKTRSVLGE-GYGSARSEDTWIPTETSREKVNSVGW-NDQFACSAT 1038

Query: 411  SFGTVVKW 434
            + G  V+W
Sbjct: 1039 NDG-FVRW 1045


>U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.5 protein.
          Length = 308

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 181 NRAHNDKIVSVDLSPEWPEKRCILT 255
           N+ HN+  V VD S +W +K CI+T
Sbjct: 275 NQEHNENCVEVDHSGQWTDKLCIIT 299


>AL032629-1|CAA21557.1|  399|Caenorhabditis elegans Hypothetical
           protein Y102F5A.1 protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 255 GAADGTVKQWVITNIAQEFKINSTHSHEVHH 347
           GA D T+ +W+I +I++        S E HH
Sbjct: 334 GAKDATISKWLIEDISKPLHTRRFASFEYHH 364


>AL032626-28|CAO82072.1|  337|Caenorhabditis elegans Hypothetical
           protein Y37D8A.9b protein.
          Length = 337

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = +1

Query: 148 DSKQPYCVHF--WNRAHNDKI 204
           D K+ YCVHF  WN  +++KI
Sbjct: 34  DGKELYCVHFKGWNNRYDEKI 54


>AL032626-8|CAA21528.1|  335|Caenorhabditis elegans Hypothetical
           protein Y37D8A.9a protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = +1

Query: 148 DSKQPYCVHF--WNRAHNDKI 204
           D K+ YCVHF  WN  +++KI
Sbjct: 34  DGKELYCVHFKGWNNRYDEKI 54


>Z66565-2|CAA91478.2|  502|Caenorhabditis elegans Hypothetical
           protein T04F8.2 protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -2

Query: 607 TSNFVNSFSLTIQIQDKYNP 548
           ++N +  + +T+QIQ+KYNP
Sbjct: 140 SANVIPGYQMTMQIQEKYNP 159


>AC006684-12|AAN60497.1|  528|Caenorhabditis elegans Hypothetical
           protein T02H6.1b protein.
          Length = 528

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 198 QNCKC*PITRMAREEMYPNGAADGTVKQW 284
           QNC       M  EE +  G+ADG++  W
Sbjct: 331 QNCVSLDCVAMINEEHFATGSADGSIALW 359


>AC006684-11|AAF39968.1|  550|Caenorhabditis elegans Hypothetical
           protein T02H6.1a protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 198 QNCKC*PITRMAREEMYPNGAADGTVKQW 284
           QNC       M  EE +  G+ADG++  W
Sbjct: 331 QNCVSLDCVAMINEEHFATGSADGSIALW 359


>U80843-8|AAB37963.1|  250|Caenorhabditis elegans Hypothetical
           protein C32B5.7 protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +3

Query: 318 NSTHSHEVHHNEKEEVTGVGYSNEQ---FAITVGSFGT 422
           N T       NEK  +T VGY N++   + I  GSFGT
Sbjct: 213 NPTEEECKSTNEKRALTIVGYGNDKGQNYWIVKGSFGT 250


>AF039040-4|AAB94182.1|  368|Caenorhabditis elegans Hypothetical
           protein T22B11.2 protein.
          Length = 368

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +1

Query: 61  ISKDGWLVYSGPGKSLCIVEPLKNYNSVIDSKQPYCVHF 177
           +SKD    + G   +  IVE L+ Y + +D  +PY + +
Sbjct: 172 VSKDFDWYFKGDDDTYLIVENLQRYLATLDPNKPYFIGY 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,088,344
Number of Sequences: 27780
Number of extensions: 329212
Number of successful extensions: 1078
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)