Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0316
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass...    30   1.5  
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.     30   1.5  
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.     30   1.5  
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p...    28   6.2  

>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 152, isoform a protein.
          Length = 2560

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 199  KSSEHRSHLCAGIRTIRLDTGGFVYIEES 113
            KS +HR HL    R I + T G +Y+ ES
Sbjct: 1278 KSLDHRRHLIQNARDITVGTDGAIYVVES 1306


>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
          Length = 2502

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 199  KSSEHRSHLCAGIRTIRLDTGGFVYIEES 113
            KS +HR HL    R I + T G +Y+ ES
Sbjct: 1220 KSLDHRRHLIQNARDITVGTDGAIYVVES 1248


>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
          Length = 2684

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 199  KSSEHRSHLCAGIRTIRLDTGGFVYIEES 113
            KS +HR HL    R I + T G +Y+ ES
Sbjct: 1402 KSLDHRRHLIQNARDITVGTDGAIYVVES 1430


>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
            C26C6.1a protein.
          Length = 1883

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = +1

Query: 70   GAMAVRVAWFYHPEETPLCTQTLQYPGGLFESPHTDENDVQTISHKCEVLPLAQYQERM 246
            G  A++  W Y PEET            +F +P  D    + +  +C V+ L+ Y  ++
Sbjct: 1028 GEKALQGHWVYRPEETLHLASRKFMKQEVFLTPFRDTVLAERLRGRCVVISLSTYTSKV 1086


>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
            protein C26C6.1a protein.
          Length = 1883

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = +1

Query: 70   GAMAVRVAWFYHPEETPLCTQTLQYPGGLFESPHTDENDVQTISHKCEVLPLAQYQERM 246
            G  A++  W Y PEET            +F +P  D    + +  +C V+ L+ Y  ++
Sbjct: 1028 GEKALQGHWVYRPEETLHLASRKFMKQEVFLTPFRDTVLAERLRGRCVVISLSTYTSKV 1086


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,752,865
Number of Sequences: 27780
Number of extensions: 349554
Number of successful extensions: 839
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)