Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0315
         (794 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    25   0.61 
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    25   0.61 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   4.3  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   5.7  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    22   5.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   7.5  

>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 470 NTCIFSANEDMDTCEISNRYS 532
           N CI +A  + D C I N+Y+
Sbjct: 113 NECIENAKGETDECNIGNKYT 133


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 470 NTCIFSANEDMDTCEISNRYS 532
           N CI +A  + D C I N+Y+
Sbjct: 113 NECIENAKGETDECNIGNKYT 133


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 151 LLKASVSLEQYIV*VRR*KNQYYRVNGSRPEKEM 252
           LL A   LEQY   +RR  ++ +R+     +KE+
Sbjct: 66  LLHAKDFLEQYFSSIRRLNSEAHRIRWESVQKEV 99


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 189 MSQKVEKPVLSGQRIKTRKRDEKRS 263
           M QK+EKPVLS     T      +S
Sbjct: 314 MLQKLEKPVLSSSTTTTSPMTSTKS 338


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 556 YLEKMFEEEMKKVLVYLKGFDSRTAHQA 639
           Y E  FEE  K+V  Y+K     TA  A
Sbjct: 162 YSEARFEEIKKEVSSYIKKIGYNTASVA 189


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 323 LDAAYKYLDSAGSKLDYRRYGEVIFDVLI 409
           +D  Y  LDS    ++   YG  + DV++
Sbjct: 163 MDLHYYPLDSQNCTVEIESYGYTVLDVVM 191


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 191 ESEGRKTSIIGSTDQDQKKR*EEKY 265
           ESE R+ S +GST+    K   +++
Sbjct: 371 ESENRRNSCLGSTETYYSKHNTQQF 395


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,208
Number of Sequences: 438
Number of extensions: 5618
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)