Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0314
(747 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 164 5e-41
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 164 5e-41
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 158 3e-39
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 153 2e-37
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 111 5e-25
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 111 5e-25
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 5e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 5e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 66 2e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 66 2e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 66 2e-11
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 9e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 36 0.030
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 35 0.070
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 34 0.093
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 34 0.12
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.28
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.28
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.87
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 31 0.87
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.87
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 30 1.5
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 30 1.5
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.6
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.6
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.6
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.6
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.6
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.6
AC084196-7|AAK29949.2| 284|Caenorhabditis elegans Hypothetical ... 29 3.5
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.6
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.1
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 164 bits (399), Expect = 5e-41
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 436
IALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTR
Sbjct: 75 IALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTR 134
Query: 437 EHALLAFTLGVKQLIVGVNKMDST 508
EHALLA TLGVKQLIV NKMDST
Sbjct: 135 EHALLAQTLGVKQLIVACNKMDST 158
Score = 153 bits (370), Expect = 2e-37
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 90.6 bits (215), Expect = 1e-18
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = +1
Query: 511 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQPKCLGSRGWQVERK 690
PP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE+ +GW VERK
Sbjct: 160 PPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERK 219
Query: 691 EGXS*TGK 714
EG + +GK
Sbjct: 220 EGNA-SGK 226
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 164 bits (399), Expect = 5e-41
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 436
IALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTR
Sbjct: 75 IALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTR 134
Query: 437 EHALLAFTLGVKQLIVGVNKMDST 508
EHALLA TLGVKQLIV NKMDST
Sbjct: 135 EHALLAQTLGVKQLIVACNKMDST 158
Score = 153 bits (370), Expect = 2e-37
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 90.6 bits (215), Expect = 1e-18
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = +1
Query: 511 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQPKCLGSRGWQVERK 690
PP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE+ +GW VERK
Sbjct: 160 PPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERK 219
Query: 691 EGXS*TGK 714
EG + +GK
Sbjct: 220 EGNA-SGK 226
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 158 bits (384), Expect = 3e-39
Identities = 91/146 (62%), Positives = 97/146 (66%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 436
IALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTR
Sbjct: 75 IALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTR 134
Query: 437 EHALLAFTLGVKQLIVGVNKMDSTNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFL 616
EHALLA TLGVKQL+ S T SPD +SRR T Q L
Sbjct: 135 EHALLAQTLGVKQLV-------SLRSPTRSPD----------SSRRSDTIQRLFHLSQSP 177
Query: 617 DGTETTCWSFNQNALVQGDGRWNVRK 694
D TETTC + DG N RK
Sbjct: 178 DSTETTCLRSPRTCHGSRDGLLNARK 203
Score = 153 bits (370), Expect = 2e-37
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 153 bits (370), Expect = 2e-37
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAERELGITI 254
DKLKAERE GITI
Sbjct: 61 DKLKAERERGITI 73
Score = 92.3 bits (219), Expect(2) = 3e-19
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +2
Query: 257 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 385
IALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 75 IALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 90.6 bits (215), Expect = 1e-18
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = +1
Query: 511 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQPKCLGSRGWQVERK 690
PP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE+ +GW VERK
Sbjct: 126 PPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERK 185
Query: 691 EGXS*TGK 714
EG + +GK
Sbjct: 186 EGNA-SGK 192
Score = 20.6 bits (41), Expect(2) = 3e-19
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 476 LIVGVNKMDST 508
L+V NKMDST
Sbjct: 114 LVVACNKMDST 124
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 216 DKLKAER 236
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 111 bits (267), Expect = 5e-25
Identities = 51/80 (63%), Positives = 62/80 (77%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 451
FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL
Sbjct: 243 FETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALL 302
Query: 452 AFTLGVKQLIVGVNKMDSTN 511
+LGV QLIV VNK+D+ +
Sbjct: 303 LRSLGVTQLIVAVNKLDTVD 322
Score = 88.2 bits (209), Expect = 5e-18
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +3
Query: 45 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 224
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 225 KAERELGITI 254
+ ERE G+T+
Sbjct: 227 EEERERGVTM 236
Score = 34.3 bits (75), Expect = 0.093
Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +1
Query: 517 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 642
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 323 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 363
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 111 bits (267), Expect = 5e-25
Identities = 51/80 (63%), Positives = 62/80 (77%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 451
FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL
Sbjct: 261 FETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALL 320
Query: 452 AFTLGVKQLIVGVNKMDSTN 511
+LGV QLIV VNK+D+ +
Sbjct: 321 LRSLGVTQLIVAVNKLDTVD 340
Score = 88.2 bits (209), Expect = 5e-18
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +3
Query: 45 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 224
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 225 KAERELGITI 254
+ ERE G+T+
Sbjct: 245 EEERERGVTM 254
Score = 34.3 bits (75), Expect = 0.093
Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +1
Query: 517 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 642
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 341 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 381
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 103 bits (247), Expect = 1e-22
Identities = 45/77 (58%), Positives = 58/77 (75%)
Frame = +2
Query: 272 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 451
FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L
Sbjct: 182 FETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSML 241
Query: 452 AFTLGVKQLIVGVNKMD 502
T GVK L++ VNKMD
Sbjct: 242 VKTAGVKHLVILVNKMD 258
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +3
Query: 39 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 218
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 219 KLKAERELGITI 254
ERE G T+
Sbjct: 164 TNDEEREKGKTV 175
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/38 (36%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +1
Query: 517 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHG 627
+ E RF+EI+ +++ +++K+G+NP + +VP SG G
Sbjct: 264 WEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTG 301
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 68.5 bits (160), Expect = 5e-12
Identities = 35/66 (53%), Positives = 43/66 (65%)
Frame = +2
Query: 305 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 484
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 485 GVNKMD 502
+NK D
Sbjct: 167 FINKAD 172
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 48 KTHINIVVIGHVDSGKSTTT 107
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 68.5 bits (160), Expect = 5e-12
Identities = 35/66 (53%), Positives = 43/66 (65%)
Frame = +2
Query: 305 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 484
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 485 GVNKMD 502
+NK D
Sbjct: 167 FINKAD 172
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 48 KTHINIVVIGHVDSGKSTTT 107
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 448
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 106 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 158
Query: 449 LAFTLGV--KQLIVGVNKMD 502
LA +GV ++V +NK+D
Sbjct: 159 LARQVGVPLDNIVVFMNKVD 178
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 42 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 212
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 213 LDKLKAER 236
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 448
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 449 LAFTLGV--KQLIVGVNKMD 502
LA +GV ++V +NK+D
Sbjct: 160 LARQVGVPLDNIVVFMNKVD 179
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 42 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 212
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 213 LDKLKAER 236
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +2
Query: 269 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 448
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 449 LAFTLGV--KQLIVGVNKMD 502
LA +GV ++V +NK+D
Sbjct: 160 LARQVGVPLDNIVVFMNKVD 179
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 42 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 212
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 213 LDKLKAER 236
L+ A+R
Sbjct: 106 LEYETAKR 113
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.4 bits (100), Expect = 9e-05
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 HIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 430
HI + E +K VT +D PGH F G AD VL+VAA G E Q
Sbjct: 192 HIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------Q 244
Query: 431 TREHALLAFTLGVKQLIVGVNKMDSTN 511
T + A V QL+V VNK+D N
Sbjct: 245 TAQSIKFAKDANV-QLVVAVNKIDKPN 270
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = +2
Query: 293 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 472
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 473 QLIVGVNKMDSTNHHTVSPDLRKSRR 550
++I+ +NK D +S +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 57 INIVVIGHVDSGKSTTT 107
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 35.9 bits (79), Expect = 0.030
Identities = 27/65 (41%), Positives = 33/65 (50%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 240 LGITI 254
GIT+
Sbjct: 74 RGITV 78
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 34.7 bits (76), Expect = 0.070
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +2
Query: 287 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 466
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 467 VKQLIVGVNKMD 502
+ Q+I +NK+D
Sbjct: 155 I-QIIPVINKID 165
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 176
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 34.3 bits (75), Expect = 0.093
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = -1
Query: 525 LTVWWLVESILFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 367
L ++ L+ LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 3 LAIFVLLILNLFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +2
Query: 290 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 469
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 470 KQLIVGVNKMD 502
L++ NK+D
Sbjct: 182 NHLMILQNKVD 192
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
NI + H+DSGK+T T ++Y G ID + +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 240 LGITI 254
GITI
Sbjct: 96 RGITI 100
Score = 29.1 bits (62), Expect = 3.5
Identities = 29/92 (31%), Positives = 37/92 (40%)
Frame = +2
Query: 293 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 472
+ IID PGH DF + D AVL++ G G G+ T L + +
Sbjct: 114 INIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQSQTFTVNRQLARYNV--- 165
Query: 473 QLIVGVNKMDSTNHHTVSPDLRKSRRKYPHTS 568
I VNKMD N T L R K H +
Sbjct: 166 PFICFVNKMD-RNGATPLKALDGLRNKLNHNA 196
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 131
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 287 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 397
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 131
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 287 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 397
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 12 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 122
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 31.1 bits (67), Expect = 0.87
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +2
Query: 299 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 478
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 479 IVGVNKMDSTNHHTVSP 529
++ +NK+D + +P
Sbjct: 605 VIALNKIDRLYEYESNP 621
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 12 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 122
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 278 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 397
+ Y + IID PGH +F M AD V++V A G
Sbjct: 198 SKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 278 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 397
+ Y + IID PGH +F M AD V++V A G
Sbjct: 73 SKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 138 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 138 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 557 PHTSRRLATTQLLSLSCPFLD 619
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 557 PHTSRRLATTQLLSLSCPFLD 619
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 557 PHTSRRLATTQLLSLSCPFLD 619
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 557 PHTSRRLATTQLLSLSCPFLD 619
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AC084196-7|AAK29949.2| 284|Caenorhabditis elegans Hypothetical
protein Y55D5A.6 protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Frame = -3
Query: 328 EISVSRSINDGNIVLASFELPESNMIVIPSSRSAFSL------SNTQAYLK--DPLPISW 173
EI + I + ++L +F+LP+ +M ++P+ + + +N Q L DP+ W
Sbjct: 38 EIGIENLIQEHELILGNFQLPKISMHILPAGEESLTTKTQNFEANEQKVLNVGDPIMFEW 97
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 57 INIVVIGHVDSGKSTTT 107
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 239
+I+ GH+D S GH +K GI E FE E ++ + + + ERE
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691
Query: 240 LGI 248
L +
Sbjct: 1692 LAM 1694
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 293 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 388
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +2
Query: 461 LGVKQLIVGVNK---MDSTNHHT--VSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDG 622
+G+K VGV + +D TN S ++R + P T +++ QLL PF+DG
Sbjct: 1822 IGLKNAPVGVEQQFSVDYTNSGASIASVEVRHGDQTIPITVKKMKPGQLLCTFTPFVDG 1880
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,420,252
Number of Sequences: 27780
Number of extensions: 372364
Number of successful extensions: 1206
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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