Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0310
         (475 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...   106   4e-23
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...   106   4e-23
AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a ...   106   4e-23
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...   106   4e-23
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...   105   8e-23
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...   103   3e-22
AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.             29   6.2  

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  106 bits (254), Expect = 4e-23
 Identities = 45/81 (55%), Positives = 55/81 (67%)
 Frame = +2

Query: 11  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYXPGYFGKLGMRN 190
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKY PGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 191 FHFRKNXNFCPVLNLDKLWTL 253
           +H ++N +FCP +NLDKLWTL
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTL 81



 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 29/66 (43%), Positives = 36/66 (54%)
 Frame = +1

Query: 256 SEQTRLKYASAPXGXVPVINIVKAGYYXLXCXGXLPKQPVIVXXXXXXXXXXXXIXDXGG 435
           SEQTR+  A    G  P+I++V++GYY +   G LPKQPVIV            I   GG
Sbjct: 83  SEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGG 142

Query: 436 ACXLSA 453
           AC L A
Sbjct: 143 ACVLVA 148


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  106 bits (254), Expect = 4e-23
 Identities = 45/81 (55%), Positives = 55/81 (67%)
 Frame = +2

Query: 11  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYXPGYFGKLGMRN 190
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKY PGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 191 FHFRKNXNFCPVLNLDKLWTL 253
           +H ++N +FCP +NLDKLWTL
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTL 81



 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 29/66 (43%), Positives = 36/66 (54%)
 Frame = +1

Query: 256 SEQTRLKYASAPXGXVPVINIVKAGYYXLXCXGXLPKQPVIVXXXXXXXXXXXXIXDXGG 435
           SEQTR+  A    G  P+I++V++GYY +   G LPKQPVIV            I   GG
Sbjct: 83  SEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGG 142

Query: 436 ACXLSA 453
           AC L A
Sbjct: 143 ACVLVA 148


>AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a
           protein.
          Length = 106

 Score =  106 bits (254), Expect = 4e-23
 Identities = 45/81 (55%), Positives = 55/81 (67%)
 Frame = +2

Query: 11  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYXPGYFGKLGMRN 190
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKY PGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 191 FHFRKNXNFCPVLNLDKLWTL 253
           +H ++N +FCP +NLDKLWTL
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTL 81


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score =  106 bits (254), Expect = 4e-23
 Identities = 45/81 (55%), Positives = 55/81 (67%)
 Frame = +2

Query: 11  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYXPGYFGKLGMRN 190
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKY PGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 191 FHFRKNXNFCPVLNLDKLWTL 253
           +H ++N +FCP +NLDKLWTL
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTL 81



 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 29/66 (43%), Positives = 36/66 (54%)
 Frame = +1

Query: 256 SEQTRLKYASAPXGXVPVINIVKAGYYXLXCXGXLPKQPVIVXXXXXXXXXXXXIXDXGG 435
           SEQTR+  A    G  P+I++V++GYY +   G LPKQPVIV            I   GG
Sbjct: 83  SEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGG 142

Query: 436 ACXLSA 453
           AC L A
Sbjct: 143 ACVLVA 148


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score =  105 bits (252), Expect = 8e-23
 Identities = 44/76 (57%), Positives = 53/76 (69%)
 Frame = +2

Query: 26  KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYXPGYFGKLGMRNFHFRK 205
           +KTRKLRGHVS                 NAGG HHHRIN DKY PGYFGK+GM+++H ++
Sbjct: 5   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 64

Query: 206 NXNFCPVLNLDKLWTL 253
           N +FCP +NLDKLWTL
Sbjct: 65  NQSFCPTVNLDKLWTL 80



 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 29/66 (43%), Positives = 36/66 (54%)
 Frame = +1

Query: 256 SEQTRLKYASAPXGXVPVINIVKAGYYXLXCXGXLPKQPVIVXXXXXXXXXXXXIXDXGG 435
           SEQTR+  A    G  P+I++V++GYY +   G LPKQPVIV            I   GG
Sbjct: 82  SEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGG 141

Query: 436 ACXLSA 453
           AC L A
Sbjct: 142 ACVLVA 147


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  103 bits (247), Expect = 3e-22
 Identities = 44/81 (54%), Positives = 55/81 (67%)
 Frame = +2

Query: 11  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYXPGYFGKLGMRN 190
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKY PGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 191 FHFRKNXNFCPVLNLDKLWTL 253
           ++ ++N +FCP +NLDKLWTL
Sbjct: 61  YNLKRNQSFCPTVNLDKLWTL 81



 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 28/66 (42%), Positives = 35/66 (53%)
 Frame = +1

Query: 256 SEQTRLKYASAPXGXVPVINIVKAGYYXLXCXGXLPKQPVIVXXXXXXXXXXXXIXDXGG 435
           SEQTR+  A    G  P+I++V++GYY +   G L KQPVIV            I   GG
Sbjct: 83  SEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLAKQPVIVKAKLFSRRAEEKIKSVGG 142

Query: 436 ACXLSA 453
           AC L A
Sbjct: 143 ACVLVA 148


>AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.
          Length = 126

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -2

Query: 180 PSLPKYPGWYLSMLIL*WCSPPALPRPPGCLRCFPIRPCP---*LT*PLSFLVF 28
           P+LPK+PG  ++ L   W S    P P G +    + PCP       PL FLV+
Sbjct: 55  PALPKWPGHLMAELQGPWLSLAHCPSPSGPI----VLPCPFRVQFEPPLQFLVW 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,365,894
Number of Sequences: 237096
Number of extensions: 1007714
Number of successful extensions: 1907
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1900
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)