Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0309
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 130 7e-31
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 128 3e-30
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 128 3e-30
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 128 3e-30
AC024755-1|AAF59637.2| 369|Caenorhabditis elegans Hypothetical ... 30 1.9
AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical... 29 2.5
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 130 bits (315), Expect = 7e-31
Identities = 67/149 (44%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Frame = +3
Query: 255 VCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFC 434
VCHTDAYTL G DPEG+FPVVL T PGDHVVPLYVPQC C++C
Sbjct: 220 VCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGKGVTGFAPGDHVVPLYVPQCKECEYC 279
Query: 435 LNPKTNLCQKVRSTQGQGVMPDGTSDSAVKDRN----STISWVVQHSVSTQLF*KFLSVK 602
NPKTN+CQK+R +QG G MPDGTS + S +++V + V
Sbjct: 280 KNPKTNMCQKIRVSQGDGFMPDGTSRFTCNGKQLFHFMGCSTFSEYTVVADI--SLCKVN 337
Query: 603 LQRLLH*IKFVCWGCGVPTGYGXRLEYCQ 689
Q L + + GCG+ TGYG L C+
Sbjct: 338 PQAPLEKVSLL--GCGISTGYGAVLNTCK 364
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +2
Query: 509 RFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLG 643
RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLG
Sbjct: 305 RFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPQAPLEKVSLLG 349
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 128 bits (310), Expect = 3e-30
Identities = 66/149 (44%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Frame = +3
Query: 255 VCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFC 434
VCHTDAYTL G DPEG+FPVVL T PGDHVVPLYVPQC C++C
Sbjct: 47 VCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYC 106
Query: 435 LNPKTNLCQKVRSTQGQGVMPDGTSDSAVKDRN----STISWVVQHSVSTQLF*KFLSVK 602
NPKTNLCQK+R +QG G MPDG+S + S +++V + V
Sbjct: 107 KNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADI--SLCKVN 164
Query: 603 LQRLLH*IKFVCWGCGVPTGYGXRLEYCQ 689
+ L + + GCG+ TGYG L C+
Sbjct: 165 PEAPLEKVSLL--GCGISTGYGAVLNTCK 191
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +2
Query: 509 RFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLG 643
RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLG
Sbjct: 132 RFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLG 176
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = +1
Query: 124 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITAT 252
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYT 45
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 128 bits (310), Expect = 3e-30
Identities = 66/149 (44%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Frame = +3
Query: 255 VCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFC 434
VCHTDAYTL G DPEG+FPVVL T PGDHVVPLYVPQC C++C
Sbjct: 47 VCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYC 106
Query: 435 LNPKTNLCQKVRSTQGQGVMPDGTSDSAVKDRN----STISWVVQHSVSTQLF*KFLSVK 602
NPKTNLCQK+R +QG G MPDG+S + S +++V + V
Sbjct: 107 KNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADI--SLCKVN 164
Query: 603 LQRLLH*IKFVCWGCGVPTGYGXRLEYCQ 689
+ L + + GCG+ TGYG L C+
Sbjct: 165 PEAPLEKVSLL--GCGISTGYGAVLNTCK 191
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +2
Query: 509 RFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLG 643
RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLG
Sbjct: 132 RFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLG 176
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = +1
Query: 124 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITAT 252
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYT 45
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 128 bits (310), Expect = 3e-30
Identities = 66/149 (44%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Frame = +3
Query: 255 VCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFC 434
VCHTDAYTL G DPEG+FPVVL T PGDHVVPLYVPQC C++C
Sbjct: 49 VCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYC 108
Query: 435 LNPKTNLCQKVRSTQGQGVMPDGTSDSAVKDRN----STISWVVQHSVSTQLF*KFLSVK 602
NPKTNLCQK+R +QG G MPDG+S + S +++V + V
Sbjct: 109 KNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADI--SLCKVN 166
Query: 603 LQRLLH*IKFVCWGCGVPTGYGXRLEYCQ 689
+ L + + GCG+ TGYG L C+
Sbjct: 167 PEAPLEKVSLL--GCGISTGYGAVLNTCK 193
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +2
Query: 509 RFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLG 643
RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLG
Sbjct: 134 RFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLG 178
Score = 58.8 bits (136), Expect = 4e-09
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = +1
Query: 124 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGSAI 264
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVK +A+
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKFQILYTAV 49
>AC024755-1|AAF59637.2| 369|Caenorhabditis elegans Hypothetical
protein Y34B4A.7 protein.
Length = 369
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1
Query: 284 GECIRVSMADPVAVILTRTSPAFGGSTS 201
G CI+VS+ D V VI T AF STS
Sbjct: 314 GSCIKVSITDEVNVIAICTKQAFTDSTS 341
>AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical
protein Y57A10A.15 protein.
Length = 1072
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Frame = +3
Query: 486 GVMPDGTSDSAVKDR---NSTISWVVQHS 563
G +P+GT DSA DR S ++W+VQ S
Sbjct: 923 GKLPEGTPDSAYFDRKYKRSVMNWIVQSS 951
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,744,669
Number of Sequences: 27780
Number of extensions: 349389
Number of successful extensions: 830
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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