Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0307
(695 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 226 3e-58
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 213 3e-54
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 197 2e-49
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 169 7e-41
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 159 5e-38
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 135 8e-31
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 114 2e-24
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 70 6e-21
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 87 5e-16
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 82 1e-14
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 80 6e-14
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 68 3e-10
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 56 6e-07
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 55 2e-06
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 46 7e-04
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 42 0.011
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 34 3.8
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 34 3.8
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 6.7
UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1; Planta... 33 6.7
UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma j... 33 6.7
UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila m... 33 6.7
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 226 bits (553), Expect = 3e-58
Identities = 115/197 (58%), Positives = 129/197 (65%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARPSANPLRSFTWWXY*VPCXASGHR* 248
RD WH R TGGKR P KKR YELGRPAA + P
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGN 64
Query: 249 LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRX 428
WGS TRKTRIIDVV NASNN LVRTKTLVKN IV++D+TP+RQWYESHY LPLGR
Sbjct: 65 FSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRK 124
Query: 429 KGAKLTEAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQCGR 608
KGAKLT EE I+NKKRS+K +KY ++ L + QG AC+ASRPGQCGR
Sbjct: 125 KGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGR 184
Query: 609 ADGYILEGKELEFYLKK 659
ADGY+LEGKELEFYL+K
Sbjct: 185 ADGYVLEGKELEFYLRK 201
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +1
Query: 103 GNVRPYARRGSMS*GVPLPNTRLGPQRIHSVRSRGGXTKYRALRLDTGNFS 255
G +PY ++ G P NT++GP+RIH+VR RGG KYRALRLD GNFS
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFS 66
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 213 bits (520), Expect = 3e-54
Identities = 114/197 (57%), Positives = 129/197 (65%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARPSANPLRSFTWWXY*VPCXASGHR* 248
RD WH R TGGKR P KKR YELGRPAA + P H
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRI------------------HTV 46
Query: 249 LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRX 428
+ G TRKTRIIDVV NASNN LVRTKTLVKN IV++D+TP+RQWYESHY LPLGR
Sbjct: 47 RVRGGC--TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRK 104
Query: 429 KGAKLTEAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQCGR 608
KGAKLT EE I+NKKRS+K +KY ++ L + QG AC+ASRPGQCGR
Sbjct: 105 KGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGR 164
Query: 609 ADGYILEGKELEFYLKK 659
ADGY+LEGKELEFYL+K
Sbjct: 165 ADGYVLEGKELEFYLRK 181
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 103 GNVRPYARRGSMS*GVPLPNTRLGPQRIHSVRSRGGXTK 219
G +PY ++ G P NT++GP+RIH+VR RGG T+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGCTR 54
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 197 bits (480), Expect = 2e-49
Identities = 104/199 (52%), Positives = 124/199 (62%), Gaps = 2/199 (1%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARPSANPLRSFTWWXY*VPCXASGHR* 248
RD H RATGGKR +RKKR +ELGRPAA + +
Sbjct: 5 RDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGN 64
Query: 249 LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRX 428
W S RKTRI DVV NASNN LVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGR
Sbjct: 65 FAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRK 124
Query: 429 KGAKLTEAEEA--IINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQC 602
+ K + E+ ++ KKRS+K +KYL ++ + T G AC++SRPGQC
Sbjct: 125 RNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILACISSRPGQC 184
Query: 603 GRADGYILEGKELEFYLKK 659
GR+DGYILEGKELEFYLKK
Sbjct: 185 GRSDGYILEGKELEFYLKK 203
Score = 55.2 bits (127), Expect = 1e-06
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1
Query: 145 GVPLPNTRLGPQRIHSVRSRGGXTKYRALRLDTGNFS 255
G P NT+LG R+H VR+RGG TK RALRL+TGNF+
Sbjct: 30 GRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFA 66
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 169 bits (410), Expect = 7e-41
Identities = 86/145 (59%), Positives = 94/145 (64%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARPSANPLRSFTWWXY*VPCXASGHR* 248
RD WH R TGGKR P KKR YELGRPAA + P
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGN 64
Query: 249 LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRX 428
WGS TRKTRIIDVV NASNN LVRTKTLVKN IV++D+TP+RQWYESHY LPLGR
Sbjct: 65 FSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRK 124
Query: 429 KGAKLTEAEEAIINKKRSQKTARKY 503
KGAKLT EE I+NKKRS+K +KY
Sbjct: 125 KGAKLTPEEEEILNKKRSKKIQKKY 149
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +1
Query: 103 GNVRPYARRGSMS*GVPLPNTRLGPQRIHSVRSRGGXTKYRALRLDTGNFS 255
G +PY ++ G P NT++GP+RIH+VR RGG KYRALRLD GNFS
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFS 66
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 159 bits (387), Expect = 5e-38
Identities = 102/211 (48%), Positives = 120/211 (56%), Gaps = 12/211 (5%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARPSANPLRSFTWWXY*VPCXA----S 236
RD H RATGGK+ RKKR YELGR A + S +R V A +
Sbjct: 5 RDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLS-SNKTVRRVRVRGGNVKWRALRLDT 63
Query: 237 GHR*LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLP 416
G+ WGS TRKTRI+DVV NASNN LVRT+TLVK+AIV VDA PF+QWY +HY +
Sbjct: 64 GN--YSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVD 121
Query: 417 LGRXK--------GAKLTEAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCW 572
+GR K A+ E E A K+S RK L + G
Sbjct: 122 IGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLL 181
Query: 573 ACVASRPGQCGRADGYILEGKELEFYLKKDQ 665
AC++SRPGQCGRADGYILEGKELEFY+KK Q
Sbjct: 182 ACISSRPGQCGRADGYILEGKELEFYMKKLQ 212
Score = 41.1 bits (92), Expect = 0.025
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 103 GNVRPYARRGSMS*GVPLPNTRLGPQR-IHSVRSRGGXTKYRALRLDTGNFS 255
G + + ++ G NT+L + + VR RGG K+RALRLDTGN+S
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYS 67
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 135 bits (327), Expect = 8e-31
Identities = 89/201 (44%), Positives = 115/201 (57%), Gaps = 4/201 (1%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARPSANPLRSFTWWXY*VPCXA----S 236
RD H R TGG+ +KKR YELGRP++ + + +R + A S
Sbjct: 5 RDSRHKRRLTGGRYPVHKKKRKYELGRPSSN--TKLGSKLVRKVRCRGGNLKFRALRLDS 62
Query: 237 GHR*LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLP 416
G+ WGS TRKTR++DVV NAS+N LVRTKTLVKNAIV VD TPF+ W+++HY L
Sbjct: 63 GN--FSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLE 120
Query: 417 LGRXKGAKLTEAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPG 596
LG K +E +A S+K A L LL + G AC++SRPG
Sbjct: 121 LG-----KSSEDPQA------SEKVAA--LVPRTLL-------DQFSSGRLLACISSRPG 160
Query: 597 QCGRADGYILEGKELEFYLKK 659
QCGR DGY+LEG+EL FY ++
Sbjct: 161 QCGRCDGYVLEGEELNFYRRR 181
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +1
Query: 145 GVPLPNTRLGPQRIHSVRSRGGXTKYRALRLDTGNFS 255
G P NT+LG + + VR RGG K+RALRLD+GNFS
Sbjct: 30 GRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGNFS 66
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 114 bits (274), Expect = 2e-24
Identities = 79/211 (37%), Positives = 103/211 (48%), Gaps = 14/211 (6%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGR-PAAKHQARPSANPLRSFTWWXY*VPCXASGHR 245
R H + TGGK RK+ ELGR PA +P+R+ + +
Sbjct: 5 RSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRVSPVRA-RGGNFKIRALRLDTG 63
Query: 246 *LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGR 425
W S + R++DVV NA++N LVRTKTLVKN IV VDA PF++WY HY + L
Sbjct: 64 NFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDA 123
Query: 426 XK-GAKLTEAEE--------AIINK----KRSQKTARKYLAGNVLLRLRVL*KSNSTQGV 566
K K A E A +K K S K R++ R+ +G
Sbjct: 124 DKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLREGR 183
Query: 567 CWACVASRPGQCGRADGYILEGKELEFYLKK 659
A + SRPGQ GRADG +LEG EL+FYLK+
Sbjct: 184 VLARITSRPGQSGRADGILLEGAELQFYLKR 214
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 70.1 bits (164), Expect(2) = 6e-21
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGR-PAAKHQARPSANPLRSFTWWXY*VPCXASGHR 245
RD H RATGGK+ ++KK+ +GR PA + +R + +
Sbjct: 5 RDSRHKRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRC-RYGIIKRRALRLENG 63
Query: 246 *LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHY 407
W S T+ T+I++VV NAS+N VRT TLVK AI+ +D PFR W+ Y
Sbjct: 64 NFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDPAPFRLWFLKFY 117
Score = 53.6 bits (123), Expect(2) = 6e-21
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 438 KLTEAEEAIIN-KKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQCGRAD 614
++ E + A++N K QK K L ++ G AC++SRPGQ G +
Sbjct: 157 QIAETQVALMNPSKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVLACISSRPGQTGSVE 216
Query: 615 GYILEGKELEFYLKK 659
GYILEGKEL+FY KK
Sbjct: 217 GYILEGKELDFYSKK 231
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1
Query: 160 NTRLGPQRIHSVRSRGGXTKYRALRLDTGNFS 255
NTRLG R+H VR R G K RALRL+ GNFS
Sbjct: 35 NTRLGAIRVHDVRCRYGIIKRRALRLENGNFS 66
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 86.6 bits (205), Expect = 5e-16
Identities = 39/68 (57%), Positives = 51/68 (75%)
Frame = +3
Query: 255 WGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRXKG 434
WGS TRKTRI+DVV A+NN LVRT+TLVK+AIV VDA PF+QWY +HY + +GR K
Sbjct: 165 WGSEALTRKTRILDVVYIATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKK 224
Query: 435 AKLTEAEE 458
+ + ++
Sbjct: 225 VSVAKKDD 232
Score = 37.5 bits (83), Expect = 0.31
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 160 NTRLGPQR-IHSVRSRGGXTKYRALRLDTGNFS 255
NT+L + + VR RGG TK+RALR DT N+S
Sbjct: 132 NTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYS 164
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 82.2 bits (194), Expect = 1e-14
Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Frame = +3
Query: 348 KNAIVVVDATPFRQWYESHYTLPLGRXK-----GAKLT--EAEEAIINKKRSQKTARKYL 506
K+AIV + PFRQW+E+ Y LG K G +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 507 AGNVLLRLRV--L*KSNSTQGVCWACVASRPGQCGRADGYILEGKELEFYLKK 659
L + V K G AC++S+PGQ GRADGY+ EGKELEF+ KK
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKK 113
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/72 (54%), Positives = 45/72 (62%)
Frame = +3
Query: 444 TEAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQCGRADGYI 623
T EE ++NKKRS+KT +KY AC+ASRPGQCGRADGYI
Sbjct: 71 TPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQCGRADGYI 130
Query: 624 LEGKELEFYLKK 659
LEGKELEFYL+K
Sbjct: 131 LEGKELEFYLRK 142
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 67.7 bits (158), Expect = 3e-10
Identities = 66/200 (33%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGR-PAAKHQARPSANPLRSFTWWXY*VPCXASGHR 245
R+ H ++TGG ++ RKKR + GR P+ R LR +
Sbjct: 5 REGLHKRKSTGGLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLR-VRGGGVKTRALFLSYG 63
Query: 246 *LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGR 425
+ S T K +I+ V N S+N LVRT TL K +IV +D + TL
Sbjct: 64 NFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIVYLDIAKTL----IYNTLIRNL 119
Query: 426 XKGAKLTEAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQCG 605
K+ AE+ I NK + L+G +L R + SRPGQ G
Sbjct: 120 NSNPKI--AEDTISNKILIDQI----LSGKILAR-----------------ICSRPGQSG 156
Query: 606 RADGYILEGKELEFYLKKDQ 665
RADGYILEG+EL+++LKK Q
Sbjct: 157 RADGYILEGQELDYFLKKIQ 176
Score = 33.9 bits (74), Expect = 3.8
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 160 NTRLGPQRIHSVRSRGGXTKYRALRLDTGNFS 255
NT++G + + +R RGG K RAL L GNFS
Sbjct: 35 NTKIGRRCVVKLRVRGGGVKTRALFLSYGNFS 66
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 56.4 bits (130), Expect = 6e-07
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Frame = +3
Query: 54 GIRHERDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARPSANPLRSFTWWXY*VPCXA 233
GI H D + TG + KKR Y LGR A + ++ + C
Sbjct: 2 GITH--DKMYKRSKTGAVQGKWHKKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRG 59
Query: 234 SG---------HR*LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFR 386
H WGS + K RI+ VV N+++N LVRT TLVK +V +D+ PF+
Sbjct: 60 GNIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQIDSAPFK 119
Score = 46.0 bits (104), Expect = 9e-04
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +3
Query: 573 ACVASRPGQCGRADGYILEGKELEFYLKK 659
A ++SRPGQ G ADGYILEG EL FY KK
Sbjct: 142 ARISSRPGQVGTADGYILEGPELLFYQKK 170
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1
Query: 118 YARRGSMS*GVPLPNTRLGPQRIHSVRSRGGXTKYRALRLDTGNFS 255
Y ++ + G NTR+GP+RIH VR+RGG K+R LRL++GNFS
Sbjct: 21 YRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGNFS 66
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +3
Query: 561 GVCWACVASRPGQCGRADGYILEGKELEFY 650
G +A V+SRPGQ GR DGYILEG+EL FY
Sbjct: 106 GRLYAVVSSRPGQSGRVDGYILEGEELAFY 135
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARP 176
RD H ATG KR+ RKKR +E GR A + P
Sbjct: 5 RDSRHKRSATGAKRSHYRKKRAFEKGRQPANTRIGP 40
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 46.4 bits (105), Expect = 7e-04
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +3
Query: 54 GIRHERDXWHXXRATGGKRAPIRKKRXYELG-RPAAKHQARPSANPLRSFTW-WXY*VPC 227
GI H D H R TG K RKKR G +P++ P+R Y
Sbjct: 2 GINHRGD--HKRRKTGAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALR 59
Query: 228 XASGHR*LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFR 386
GH + + R +++ VV + S+N LVRT TL K+++V + A PF+
Sbjct: 60 LDMGHFKFI--TTGKFRMAKLLQVVYHPSSNELVRTNTLTKSSVVKISAEPFK 110
Score = 41.9 bits (94), Expect = 0.014
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 558 QGVCWACVASRPGQCGRADGYILEGKELEFYLKK 659
+G +A + SRPGQ G A G++L+G EL+FY K
Sbjct: 130 KGHLYAIITSRPGQVGMAQGHVLQGDELKFYADK 163
Score = 39.9 bits (89), Expect = 0.058
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +1
Query: 160 NTRLGPQRIHSVRSRGGXTKYRALRLDTGNF 252
+T++G +++ VR RGG KY+ALRLD G+F
Sbjct: 35 STKIGERKVTPVRVRGGNRKYKALRLDMGHF 65
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 42.3 bits (95), Expect = 0.011
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 1/190 (0%)
Frame = +3
Query: 90 RATGGKRAPIRKKRXYELG-RPAAKHQARPSANPLRSFTWWXY*VPCXASGHR*LLWGSX 266
+ TGGK+ I KK+ + G P R + + + + G W +
Sbjct: 5 KLTGGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWKTM 64
Query: 267 XSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRXKGAKLT 446
++ ++I+ V+ N +N LV+ + L K I+ +D+ PF
Sbjct: 65 QLSKNSKILSVLYNQANLKLVQKRNLSKGTIIKIDSMPF--------------------- 103
Query: 447 EAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQCGRADGYIL 626
+ I+ +RS K+ ++L L++L +G+ A + SRPGQ G+ +G I+
Sbjct: 104 --IKTILTNQRSFIDLLKFQIDKMIL-LKLL-----NKGLLIARITSRPGQTGKINGTIM 155
Query: 627 EGKELEFYLK 656
E +L+ + +
Sbjct: 156 EDYDLKLFFR 165
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 33.9 bits (74), Expect = 3.8
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 276 RKTRIIDVVXNASNNXLVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRXKGAKLTEA 452
++ ++ + AS L KTL K A+ ++D PF W + L R G L A
Sbjct: 183 QRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYA 242
Query: 453 EEAIINKKRS 482
+E +INK+ +
Sbjct: 243 QE-LINKQNT 251
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 94 PPVGNVRPYARRGSMS*GVPLPNTRLGPQRIHSVRSRGGXTKYRALRLDTGN 249
P G +RP + G TRLG + + +RS GG +K+ LR D N
Sbjct: 12 PSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYAN 63
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 33.1 bits (72), Expect = 6.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 357 IVVVDATPFRQWYESHYTLPLGRXK 431
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1;
Plantago major|Rep: Plasma memebrane H+-ATPase -
Plantago major (Common plantain)
Length = 106
Score = 33.1 bits (72), Expect = 6.7
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 29 ELVDPPGCRNSAR 67
ELVDPPGCRNSAR
Sbjct: 12 ELVDPPGCRNSAR 24
>UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09205 protein - Schistosoma
japonicum (Blood fluke)
Length = 215
Score = 33.1 bits (72), Expect = 6.7
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 29 ELVDPPGCRNSAR 67
ELVDPPGCRNSAR
Sbjct: 12 ELVDPPGCRNSAR 24
>UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila
melanogaster|Rep: Elastin like protein - Drosophila
melanogaster (Fruit fly)
Length = 110
Score = 33.1 bits (72), Expect = 6.7
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 29 ELVDPPGCRNSAR 67
ELVDPPGCRNSAR
Sbjct: 11 ELVDPPGCRNSAR 23
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,546,112
Number of Sequences: 1657284
Number of extensions: 11783404
Number of successful extensions: 28784
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 27700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28760
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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