Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0307
(695 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 226 5e-59
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 226 5e-59
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 226 5e-59
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 226 5e-59
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 213 5e-55
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 88 3e-17
AK127331-1|BAC86934.1| 178|Homo sapiens , member 1 (TRPV1). pr... 30 9.1
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 226 bits (553), Expect = 5e-59
Identities = 115/197 (58%), Positives = 129/197 (65%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARPSANPLRSFTWWXY*VPCXASGHR* 248
RD WH R TGGKR P KKR YELGRPAA + P
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGN 64
Query: 249 LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRX 428
WGS TRKTRIIDVV NASNN LVRTKTLVKN IV++D+TP+RQWYESHY LPLGR
Sbjct: 65 FSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRK 124
Query: 429 KGAKLTEAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQCGR 608
KGAKLT EE I+NKKRS+K +KY ++ L + QG AC+ASRPGQCGR
Sbjct: 125 KGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGR 184
Query: 609 ADGYILEGKELEFYLKK 659
ADGY+LEGKELEFYL+K
Sbjct: 185 ADGYVLEGKELEFYLRK 201
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +1
Query: 103 GNVRPYARRGSMS*GVPLPNTRLGPQRIHSVRSRGGXTKYRALRLDTGNFS 255
G +PY ++ G P NT++GP+RIH+VR RGG KYRALRLD GNFS
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFS 66
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 226 bits (553), Expect = 5e-59
Identities = 115/197 (58%), Positives = 129/197 (65%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARPSANPLRSFTWWXY*VPCXASGHR* 248
RD WH R TGGKR P KKR YELGRPAA + P
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGN 64
Query: 249 LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRX 428
WGS TRKTRIIDVV NASNN LVRTKTLVKN IV++D+TP+RQWYESHY LPLGR
Sbjct: 65 FSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRK 124
Query: 429 KGAKLTEAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQCGR 608
KGAKLT EE I+NKKRS+K +KY ++ L + QG AC+ASRPGQCGR
Sbjct: 125 KGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGR 184
Query: 609 ADGYILEGKELEFYLKK 659
ADGY+LEGKELEFYL+K
Sbjct: 185 ADGYVLEGKELEFYLRK 201
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +1
Query: 103 GNVRPYARRGSMS*GVPLPNTRLGPQRIHSVRSRGGXTKYRALRLDTGNFS 255
G +PY ++ G P NT++GP+RIH+VR RGG KYRALRLD GNFS
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFS 66
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 226 bits (553), Expect = 5e-59
Identities = 115/197 (58%), Positives = 129/197 (65%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARPSANPLRSFTWWXY*VPCXASGHR* 248
RD WH R TGGKR P KKR YELGRPAA + P
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGN 64
Query: 249 LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRX 428
WGS TRKTRIIDVV NASNN LVRTKTLVKN IV++D+TP+RQWYESHY LPLGR
Sbjct: 65 FSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRK 124
Query: 429 KGAKLTEAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQCGR 608
KGAKLT EE I+NKKRS+K +KY ++ L + QG AC+ASRPGQCGR
Sbjct: 125 KGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGR 184
Query: 609 ADGYILEGKELEFYLKK 659
ADGY+LEGKELEFYL+K
Sbjct: 185 ADGYVLEGKELEFYLRK 201
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +1
Query: 103 GNVRPYARRGSMS*GVPLPNTRLGPQRIHSVRSRGGXTKYRALRLDTGNFS 255
G +PY ++ G P NT++GP+RIH+VR RGG KYRALRLD GNFS
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFS 66
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 226 bits (553), Expect = 5e-59
Identities = 115/197 (58%), Positives = 129/197 (65%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARPSANPLRSFTWWXY*VPCXASGHR* 248
RD WH R TGGKR P KKR YELGRPAA + P
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGN 64
Query: 249 LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRX 428
WGS TRKTRIIDVV NASNN LVRTKTLVKN IV++D+TP+RQWYESHY LPLGR
Sbjct: 65 FSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRK 124
Query: 429 KGAKLTEAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQCGR 608
KGAKLT EE I+NKKRS+K +KY ++ L + QG AC+ASRPGQCGR
Sbjct: 125 KGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGR 184
Query: 609 ADGYILEGKELEFYLKK 659
ADGY+LEGKELEFYL+K
Sbjct: 185 ADGYVLEGKELEFYLRK 201
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +1
Query: 103 GNVRPYARRGSMS*GVPLPNTRLGPQRIHSVRSRGGXTKYRALRLDTGNFS 255
G +PY ++ G P NT++GP+RIH+VR RGG KYRALRLD GNFS
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFS 66
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 213 bits (520), Expect = 5e-55
Identities = 114/197 (57%), Positives = 129/197 (65%)
Frame = +3
Query: 69 RDXWHXXRATGGKRAPIRKKRXYELGRPAAKHQARPSANPLRSFTWWXY*VPCXASGHR* 248
RD WH R TGGKR P KKR YELGRPAA + P H
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRI------------------HTV 46
Query: 249 LLWGSXXSTRKTRIIDVVXNASNNXLVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRX 428
+ G TRKTRIIDVV NASNN LVRTKTLVKN IV++D+TP+RQWYESHY LPLGR
Sbjct: 47 RVRGGC--TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRK 104
Query: 429 KGAKLTEAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQCGR 608
KGAKLT EE I+NKKRS+K +KY ++ L + QG AC+ASRPGQCGR
Sbjct: 105 KGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGR 164
Query: 609 ADGYILEGKELEFYLKK 659
ADGY+LEGKELEFYL+K
Sbjct: 165 ADGYVLEGKELEFYLRK 181
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 103 GNVRPYARRGSMS*GVPLPNTRLGPQRIHSVRSRGGXTK 219
G +PY ++ G P NT++GP+RIH+VR RGG T+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGCTR 54
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 87.8 bits (208), Expect = 3e-17
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = +3
Query: 441 LTEAEEAIINKKRSQKTARKYLAGNVLLRLRVL*KSNSTQGVCWACVASRPGQCGRADGY 620
LT EE I+NKKRS+K +KY ++ L + QG AC+ASRPGQCGRADGY
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGY 60
Query: 621 ILEGKELEFYLKK 659
+LEGKELEFYL+K
Sbjct: 61 VLEGKELEFYLRK 73
>AK127331-1|BAC86934.1| 178|Homo sapiens , member 1 (TRPV1).
protein.
Length = 178
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 351 NAIVVVDATPFRQWYESHYTLPLGRXKGAKLT 446
N I+ V TPF W + H++ P G LT
Sbjct: 5 NPIIAVFRTPFAPWLQFHWSAPFSAWLGTVLT 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,328,764
Number of Sequences: 237096
Number of extensions: 1945648
Number of successful extensions: 4064
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4052
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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