Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0306
(787 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1) 48 7e-06
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2) 44 1e-04
SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59) 36 0.037
SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.065
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.35
SB_30216| Best HMM Match : TIL (HMM E-Value=3.1) 30 2.4
SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_19590| Best HMM Match : RVT_thumb (HMM E-Value=5.3) 30 2.4
SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_44556| Best HMM Match : RVP (HMM E-Value=2.3) 29 5.6
SB_36994| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_46234| Best HMM Match : Herpes_BLRF2 (HMM E-Value=2.7) 28 9.9
>SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/44 (56%), Positives = 25/44 (56%)
Frame = +3
Query: 561 DEPNVVLRRLKNAHGTP*KGVGRS*QQDGGHWKSESAKECATTH 692
DEPN LR P KGVG S QQDGGH AKEC TTH
Sbjct: 3 DEPNARLRCQSRRSSDPTKGVGCSRQQDGGHGSWNPAKECVTTH 46
>SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1)
Length = 276
Score = 48.4 bits (110), Expect = 7e-06
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = -1
Query: 631 ERPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRHQSPASSFE*AGVLTHLKFEN 452
E+PTPF G FGSS ASS YQN PT R P + + G+LT+LKFEN
Sbjct: 58 EQPTPFVGSDERRLWHPYRAFGSSRIASSGYQNGPTRTRIHCPGFNKQ-VGLLTNLKFEN 116
Query: 451 R 449
R
Sbjct: 117 R 117
>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/43 (53%), Positives = 23/43 (53%)
Frame = +3
Query: 561 DEPNVVLRRLKNAHGTP*KGVGRS*QQDGGHWKSESAKECATT 689
DEPN LR P KGVG S QQDGGH KEC TT
Sbjct: 3 DEPNARLRCQSRRSSDPTKGVGCSRQQDGGHGSWNPLKECVTT 45
>SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2)
Length = 125
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -1
Query: 652 WPPSCCH--ERPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
W P + E+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 71 WLPQASYPCEQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 119
>SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/60 (45%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -1
Query: 676 SLADSDFQWPPSCCH-----ERPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
S++ +FQ P S H E+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 19 SMSSPNFQGP-SRAHRTPQEEQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 77
>SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = -1
Query: 634 HERPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+E+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 122 YEQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 162
>SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = -1
Query: 631 ERPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
E+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 41 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 80
>SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = -1
Query: 631 ERPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
E+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 39 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 78
>SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = -1
Query: 631 ERPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
E+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 39 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTSNSH 78
>SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 40
>SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 40
>SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 40
>SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 40
>SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 40
>SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTKNSH 40
>SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 40
>SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 40
>SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 40
>SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 40
>SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 40
>SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 40
>SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSH 40
>SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNHAFGSSRIASSAYQKWPTRNSH 40
>SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = -1
Query: 631 ERPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
E+PTPF G L FGSS ASSA Q WPT + H
Sbjct: 58 EQPTPFVGSDERRLWHLNRAFGSSRIASSALQKWPTRNSH 97
>SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L +GSS ASSAYQ WPT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAYGSSRIASSAYQKWPTRNSH 40
>SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 636 QQDGGHWKSESAKECATTH 692
QQDGGH K ESAKEC TTH
Sbjct: 2 QQDGGHGKLESAKECVTTH 20
>SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPT 524
+PTPF G L FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/44 (50%), Positives = 23/44 (52%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRHQSPAS 497
+PTPF G L FGSS ASSAYQN P R PAS
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQNGPLGTRIHCPAS 45
>SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 35.9 bits (79), Expect = 0.037
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = -1
Query: 628 RPTPFHGVP*AFFRRLRTTFGSSHSASSAYQNWPTWHRH 512
+PTPF G L FGSS ASSAYQ PT + H
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKGPTRNSH 40
>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
Length = 1060
Score = 35.9 bits (79), Expect = 0.037
Identities = 18/31 (58%), Positives = 18/31 (58%)
Frame = +3
Query: 561 DEPNVVLRRLKNAHGTP*KGVGRS*QQDGGH 653
DEPN LR P KGVG S QQDGGH
Sbjct: 3 DEPNARLRCQSRRSSDPTKGVGCSRQQDGGH 33
>SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 35.1 bits (77), Expect = 0.065
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 249 FPLTST*PGIVHHLSGPSICA 187
FPL S GIVHHLSGP+ CA
Sbjct: 9 FPLASPYSGIVHHLSGPNRCA 29
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -1
Query: 253 RVSPDFDLTRHSSPSFGSQHLCS 185
RVS F L RHSSPSFGSQ + S
Sbjct: 42 RVSSGFTLFRHSSPSFGSQQMRS 64
>SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3
Query: 657 KSESAKECATTHCRSNQPENXLALKRFAYTL 749
K ESAKEC TTH +ALKR YT+
Sbjct: 2 KVESAKECVTTHLPKQLALKMMALKRRTYTV 32
>SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 322 ISLSPLYPVPTIDLHVR 272
ISLSPLYP TIDLHVR
Sbjct: 38 ISLSPLYPNLTIDLHVR 54
>SB_30216| Best HMM Match : TIL (HMM E-Value=3.1)
Length = 212
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3
Query: 654 WKSESAKECATTH 692
WK ESAKEC TTH
Sbjct: 7 WKLESAKECVTTH 19
>SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3
Query: 654 WKSESAKECATTH 692
WK ESAKEC TTH
Sbjct: 7 WKLESAKECVTTH 19
>SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3
Query: 654 WKSESAKECATTH 692
WK ESAKEC TTH
Sbjct: 86 WKLESAKECVTTH 98
>SB_19590| Best HMM Match : RVT_thumb (HMM E-Value=5.3)
Length = 243
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -2
Query: 663 PTSNGHRPAVMSDQRLFMVSHERFLGALELRLVHPTAPVLLTKIGPLGTVISLRLHRSSK 484
P + H ++++ + E F+ LRL+HP+ P L+ + GT + R S K
Sbjct: 126 PNNLTHHGEQVTEEEELSPTLENFIVLTWLRLIHPSLPRLVKQ--RYGTELRSRTLASIK 183
Query: 483 PEFS 472
PE S
Sbjct: 184 PEIS 187
>SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1520
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 637 SRTVAIGSRNPLRSVXRLTAEATSLKXXWR*NVLPI 744
SR+++I RNP+ + RL A A+S WR N+ +
Sbjct: 25 SRSLSITVRNPVVARSRLLAPASSCLSCWRRNIADV 60
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 225 LVRSKSGETLWRTVA--ILTCKSIVGTGYRG 311
L++SK E +W +LTC S +GTG RG
Sbjct: 603 LIKSKGYEFMWNEHLGYVLTCPSNLGTGLRG 633
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +3
Query: 228 VRSKSGETLWRTVA--ILTCKSIVGTGYRG 311
++SK E +W +LTC S +GTG RG
Sbjct: 235 IKSKGREFMWNKHLGYVLTCPSNLGTGLRG 264
>SB_44556| Best HMM Match : RVP (HMM E-Value=2.3)
Length = 305
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -2
Query: 663 PTSNGHRPAVMSDQRLFMVSHERFLGALELRLVHPTAPVLLTKIGPLGTVISLRLHRSSK 484
P + H ++++ + E + LRL+HP+ P L+ + GT + R S K
Sbjct: 11 PNNQTHHGEQVTEEEELSPTLENLIVLTWLRLIHPSLPRLVKQ--RYGTELRSRTLASIK 68
Query: 483 PEFS 472
PE S
Sbjct: 69 PEIS 72
>SB_36994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 195 CWDPKDGELCLVRSKSGETLWR 260
C KD +LC+ ++G TLWR
Sbjct: 589 CCSCKDYDLCIFGRRAGNTLWR 610
>SB_46234| Best HMM Match : Herpes_BLRF2 (HMM E-Value=2.7)
Length = 271
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -2
Query: 663 PTSNGHRPAVMSDQRLFMVSHERFLGALELRLVHPTAPVLLTKIGPLGTVISLRLHRSSK 484
P + H ++++ + E + LRL+HP+ P L+ + GT + R S K
Sbjct: 31 PNNLTHHGEQVTEEEELSPTLENLIVLTWLRLIHPSLPRLIKQ--RYGTELRSRTLASIK 88
Query: 483 PEFS 472
PE S
Sbjct: 89 PEIS 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,884,490
Number of Sequences: 59808
Number of extensions: 520654
Number of successful extensions: 1206
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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