Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0305
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 45 7e-05
07_01_1036 + 9021395-9021658,9024214-9024690 44 1e-04
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 40 0.002
08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546 38 0.008
07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644 37 0.013
08_01_0027 - 195321-195932,197206-197415 37 0.018
06_01_1008 - 7853089-7854147 37 0.018
08_02_1310 - 26037025-26038074 36 0.023
08_02_1304 - 26008105-26009070 36 0.041
08_02_1254 + 25607827-25607865,25608066-25608770 36 0.041
08_02_1121 + 24457413-24457528,24458395-24458552,24458927-244590... 36 0.041
08_02_1251 - 25592537-25593380,25593589-25593893 34 0.094
08_01_0801 - 7750548-7751708 33 0.16
10_08_0119 - 14952786-14953931,14954709-14954831 32 0.50
08_01_0797 + 7711772-7712869 31 0.67
10_08_0059 + 14529885-14530991 31 0.88
10_08_0129 - 15025076-15025858,15025951-15026283 31 1.2
10_08_0122 - 14982676-14983043,14983957-14985145 31 1.2
10_08_0082 + 14713989-14714046,14714109-14714953 30 1.5
06_03_0993 + 26686466-26686475,26687102-26687151,26687307-266874... 30 2.0
04_03_0991 - 21500143-21500799,21500834-21501172 29 2.7
10_08_0118 + 14948636-14949667,14949893-14949953,14951226-14951977 29 3.5
08_01_0802 - 7754561-7755628 29 3.5
10_08_0091 + 14747934-14748107,14750695-14751021 29 4.7
10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886 29 4.7
04_04_1220 + 31843628-31844755 29 4.7
10_08_0125 - 15000650-15001717 28 6.2
04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072 28 6.2
>05_03_0604 -
16132173-16132391,16132488-16132556,16132824-16132898,
16132981-16133113,16133188-16133297,16133360-16133407,
16133657-16133983,16135006-16135233,16135360-16135689,
16135780-16136586
Length = 781
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 260 AHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 427
AHKL+LS+ S F +MF M + VF +DV A L+QFMY GE+ V EE+
Sbjct: 365 AHKLILSLWSMTFDKMFTNGMKESSASNVFFEDVPVEAFFLLIQFMYSGELKVDIEEI 422
>07_01_1036 + 9021395-9021658,9024214-9024690
Length = 246
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +2
Query: 260 AHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 433
AH+++L+ SP F+ M + M ++ I+ + DVS+ LR + +MY E + ++ +
Sbjct: 83 AHRVILASRSPVFRAMLENEMEESRSGIIKIYDVSYDVLRAFVHYMYTAEALLDEQMASD 142
Query: 434 FISTAEQLQVKGXXGN-QNEESSTPSNQSRLRGQA-PGRHNKDNSVMTKLETDLDS 595
+ AE+ +VK + +S SN + + A RH+ + T L +D+
Sbjct: 143 LLVLAEKYEVKNLKAYCEKFLTSKVSNDNAITHYAFAHRHSAKQLLETSLAAIMDN 198
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVTLAAEX-LMQAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFL 346
+NMS LL+ G D+T + + AHK+VL+ SP F+ ++F M + +
Sbjct: 295 SNMSQHIGQLLTDGKRTDITFEVDGEVFPAHKVVLAARSPVFRAQLFGPMKDKNMKRITI 354
Query: 347 KDVSHSALRDLLQFMYQGEV 406
+D+ S + LL FMY E+
Sbjct: 355 EDMEASVFKALLHFMYWDEL 374
>08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546
Length = 290
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVTL-AAEXLMQAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFL 346
++++A LL + DVT E AHK+VL++ SP F+ E+F M ++ +
Sbjct: 103 SDIAAHLGKLLESKEAADVTFYVGEDTFAAHKVVLAMRSPVFKAELFGPMREAGAQVLPI 162
Query: 347 KDVSHSALRDLLQFMYQGEVNV 412
KD+ + LL F+Y +++
Sbjct: 163 KDIQPDVFKALLHFIYTDSLSI 184
>07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644
Length = 395
Score = 37.1 bits (82), Expect = 0.013
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVTL-AAEXLMQAHKLVLSVCSPYFQEMF---KMNPTQHPIVF 343
++M F+ LL+ DV+ + +QAHK +L+ SP F+ F NP H ++
Sbjct: 170 SDMGRCFNNLLNLRIGCDVSFEVGDERVQAHKWILAARSPVFKAQFFGPIGNPDLHTVI- 228
Query: 344 LKDVSHSALRDLLQFMYQGEVNVKQEELASFIST 445
++DV + ++ F+Y E+ ELA +ST
Sbjct: 229 VEDVEPLVFKAMVNFIYSDEL-PSIHELAGSVST 261
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +2
Query: 152 SLCWNNFHANMSAG-FHGLLSRGDLVDVTL-AAEXLMQAHKLVLSVCSPYFQEMF--KMN 319
S+ N + S G +L+ DVT+ + +++AHK +L+ CSP F+ MF +
Sbjct: 83 SIAVQNIASKSSLGCLSRMLTESIHADVTINTTDGVLKAHKAILASCSPVFESMFLHDLK 142
Query: 320 PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 418
+ + + D+ + L+ F+Y G + + Q
Sbjct: 143 EKESSTININDMCLESCSALIGFIY-GTIKLDQ 174
>06_01_1008 - 7853089-7854147
Length = 352
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 203 LLSRGDLVDVTLAAEXLMQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRD 376
L +G V +A E + AHK++L+ SP F F M + V +KD+ S +
Sbjct: 172 LSEKGADVTFVVAGESFL-AHKIILAARSPVFMAEFFGPMKESSSQCVEIKDIEASVFKA 230
Query: 377 LLQFMYQG 400
+L F+Y G
Sbjct: 231 MLHFIYTG 238
>08_02_1310 - 26037025-26038074
Length = 349
Score = 36.3 bits (80), Expect = 0.023
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 218 DLVDVTLAAEX-LMQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQF 388
D DV L +AH+ VL+ SP F+ M P V L+D+ +A R +L F
Sbjct: 177 DTADVALVVGGETFRAHRAVLAARSPVFKAALFGSMAEATAPSVALRDMDPAAFRAVLHF 236
Query: 389 MYQGEVNVKQEELASF 436
+Y + +ELA F
Sbjct: 237 IYTDALPDDIDELAGF 252
>08_02_1304 - 26008105-26009070
Length = 321
Score = 35.5 bits (78), Expect = 0.041
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 260 AHKLVLSVCSPYFQE--MFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 433
AH+ VL+ SP F+ + M P V L+D+ + R LL F+Y +V Q E +S
Sbjct: 167 AHRAVLAARSPVFRAELLGSMAEATMPCVTLRDIEPATFRALLHFVY---TDVLQIEGSS 223
Query: 434 FISTAEQLQ 460
ST + LQ
Sbjct: 224 STSTTDLLQ 232
>08_02_1254 + 25607827-25607865,25608066-25608770
Length = 247
Score = 35.5 bits (78), Expect = 0.041
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 215 GDLVDVTLAAEXLMQAHKLVLSVCSPYF--QEMFKMNPTQHPIVFLKDVSHSALRDLLQF 388
G V ++ E L++AH+ VL+ SP F + + M P V L D+ + R LL F
Sbjct: 81 GSDVSFSVGGETLIRAHRAVLAARSPVFSAELLGSMAEGTMPCVTLHDIEPATFRALLHF 140
Query: 389 MY 394
+Y
Sbjct: 141 VY 142
>08_02_1121 +
24457413-24457528,24458395-24458552,24458927-24459042,
24459735-24460400
Length = 351
Score = 35.5 bits (78), Expect = 0.041
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +2
Query: 203 LLSRGDLVDVTL-AAEXLMQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALR 373
+L G L D+T+ A + + AH+ +L+ SP F+ MF + + V + D+S A +
Sbjct: 179 MLQEGILTDITINATDGSIMAHRAILASRSPVFRSMFSHDLKEKELSTVDISDMSLEACQ 238
Query: 374 DLLQFMY 394
L ++Y
Sbjct: 239 AFLNYIY 245
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 34.3 bits (75), Expect = 0.094
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 260 AHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRDLLQFMYQGE 403
AH+ +L+VCSP F+ + + + + L D+ + LL FMY G+
Sbjct: 237 AHRALLAVCSPVFKALLLSSTAEAAACSITLNDIKPAMFEALLHFMYTGD 286
>08_01_0801 - 7750548-7751708
Length = 386
Score = 33.5 bits (73), Expect = 0.16
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 194 FHGLLSRGDLVDVTL-AAEXLMQAHKLVLSVCSPYFQ-EMFKM--NPTQHPIVFLKDVSH 361
F LL + DVT A HKLVL++ SP F+ E+ + P PI + D+
Sbjct: 191 FANLLQSKEGADVTFDVAGEPFSVHKLVLAMRSPVFKAELCGLLREPGTQPITIV-DMQP 249
Query: 362 SALRDLLQFMYQGEVNV 412
+ R LLQF+Y + V
Sbjct: 250 AVFRALLQFIYTDQFPV 266
>10_08_0119 - 14952786-14953931,14954709-14954831
Length = 422
Score = 31.9 bits (69), Expect = 0.50
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVT-LAAEXLMQAHKLVLSVCSPYFQ-EMFK-MNPTQHPIVFL 346
+NM + LLS + DV + AH+LVL+ SP F+ E+FK M ++ +
Sbjct: 233 SNMHMDYGDLLSSKEGTDVEFVVGGETFAAHRLVLAARSPVFKAELFKPMEEGTTDVIKI 292
Query: 347 KDVSHSALRDLLQFMY 394
++ + LL F+Y
Sbjct: 293 DNMDAQVFKALLVFIY 308
>08_01_0797 + 7711772-7712869
Length = 365
Score = 31.5 bits (68), Expect = 0.67
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLV--DVTLAAEX-LMQAHKLVLSVCSPYFQEMF--KMNPTQHPIV 340
+ +S F LL + V DV + E AHKLVL+ SP F+ F +M +
Sbjct: 174 SELSEHFGKLLEEEEDVGRDVVFSVEGESFAAHKLVLAARSPVFKAEFYGEMIERGTFSI 233
Query: 341 FLKDVSHSALRDLLQFMY 394
+KD+ S R LL F+Y
Sbjct: 234 DIKDMQPSVFRALLHFIY 251
>10_08_0059 + 14529885-14530991
Length = 368
Score = 31.1 bits (67), Expect = 0.88
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVTLAA------EXLMQAHKLVLSVCSPYFQ-EMFKMNPTQH- 331
++M F LL+ GD DV E + AH++VL+ SP F+ E+ P +
Sbjct: 180 SDMRRHFGDLLASGDGADVEFRVRGAGGEEETVAAHRVVLAARSPVFKAELLAGVPAKDG 239
Query: 332 --PIVFLKDVSHSALRDLLQFMY 394
++ + D+ R LL +MY
Sbjct: 240 GGAVIQIDDMDAEVFRSLLHYMY 262
>10_08_0129 - 15025076-15025858,15025951-15026283
Length = 371
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVT-LAAEXLMQAHKLVLSVCSPYF-QEMF---KMNPTQHPIV 340
++M + LLS DV L AH+LVL+V SP F E F K + ++
Sbjct: 151 SDMHLHYGDLLSSKRCADVEFLVGGETFAAHRLVLAVRSPVFVAEHFGPMKEGVNVNDVI 210
Query: 341 FLKDVSHSALRDLLQFMYQGE-VNVKQEELAS 433
+ D+ + LL F+Y + + QEE A+
Sbjct: 211 EINDMDAQVFKALLNFIYTDTLLEMDQEEDAT 242
>10_08_0122 - 14982676-14983043,14983957-14985145
Length = 518
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVT-LAAEXLMQAHKLVLSVCSPYF-QEMF---KMNPTQHPIV 340
++M + LLS DV L AH+LVL+V SP F E F K + ++
Sbjct: 179 SDMHLHYGDLLSSKRCADVEFLVGGETFAAHRLVLAVRSPVFVAEHFGPMKEGVNVNDVI 238
Query: 341 FLKDVSHSALRDLLQFMYQGE-VNVKQEELAS 433
+ D+ + LL F+Y + + QEE A+
Sbjct: 239 EINDMDAQVFKALLNFIYTDTLLEMDQEEDAT 270
>10_08_0082 + 14713989-14714046,14714109-14714953
Length = 300
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQE----MFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQE 421
+ AH+ VL+ SP F+ + K T V ++D+ + LL+FMY + +E
Sbjct: 141 LAAHRCVLAARSPVFKAELYGLMKEGGTAAGAVHIEDIEPRVFKVLLRFMYTDSLPEMEE 200
Query: 422 E 424
E
Sbjct: 201 E 201
>06_03_0993 +
26686466-26686475,26687102-26687151,26687307-26687419,
26687527-26687806,26688357-26688492,26688659-26688834,
26688933-26689029,26689121-26689190,26689982-26690279
Length = 409
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/105 (23%), Positives = 44/105 (41%)
Frame = +2
Query: 275 LSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQ 454
L VC P+ Q+M ++ +H H+A D + ++ K E++ + +S
Sbjct: 268 LDVCIPFEQQMMDLSHQKH--------EHAACDD---YCSVSKLMFK-EDIETALSMPVG 315
Query: 455 LQVKGXXGNQNEESSTPSNQSRLRGQAPGRHNKDNSVMTKLETDL 589
+ ++ N+ + + R A G K N V K ETDL
Sbjct: 316 VPLENGSKNRRRRAPNTQRITPARSPAKGSRRKSNDVTVKSETDL 360
>04_03_0991 - 21500143-21500799,21500834-21501172
Length = 331
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Frame = +2
Query: 200 GLLSRGDLVDVTLAAEX-LMQAHKLVLSVCSPYFQ-EMF----KMNPT-----QHPIVFL 346
GLL+ G+ DVT AH+LVL+ SP F+ E+F ++ T H + +
Sbjct: 168 GLLATGEGADVTFEVSGKTFAAHRLVLAARSPVFRAELFGPSKELGATTGGAVDHTAIRI 227
Query: 347 KDVSHSALRDLLQFMY 394
D+ LL++MY
Sbjct: 228 DDMEARDFEALLRYMY 243
>10_08_0118 + 14948636-14949667,14949893-14949953,14951226-14951977
Length = 614
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVT-LAAEXLMQAHKLVLSVCSPYFQ-EMFKMNPTQH---PIV 340
+NM F LL + DV L + AH+LVL+ SP F+ E+F PT+ ++
Sbjct: 174 SNMHLHFVDLLVSKEGTDVKFLVGGEMFAAHRLVLAARSPVFKAELF--GPTKKGTIDVI 231
Query: 341 FLKDVSHSALRDLLQFMY 394
+ ++ + LL F+Y
Sbjct: 232 QIDNMEARVFKALLDFIY 249
>08_01_0802 - 7754561-7755628
Length = 355
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVTL-AAEXLMQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFL 346
+NM LL + DV A AHKLVL++ SP F+ M + + +
Sbjct: 179 SNMMQQLGDLLESKEGADVVFDVAGETFPAHKLVLAMRSPVFKAELCGPMRESGTEPISI 238
Query: 347 KDVSHSALRDLLQFMY 394
D+ + LLQF+Y
Sbjct: 239 VDMQPVVFKALLQFIY 254
>10_08_0091 + 14747934-14748107,14750695-14751021
Length = 166
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 215 GDLVDVTLAAEXLMQAHKLVLSVCSPYFQ-EMFKMNPTQHP--IVFLKDVSHSALRDLLQ 385
GDL++ A+ + + + SP F E++ P +V ++D+ + LL+
Sbjct: 60 GDLLETGKGADVVFEVAGQTFAARSPVFSVELYGPMKESEPTGVVCVQDMEAQVFKALLR 119
Query: 386 FMYQGEVNVKQEE 424
FMY + +EE
Sbjct: 120 FMYTDSLPKMEEE 132
>10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886
Length = 334
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 260 AHKLVLSVCSPYFQ-EMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 424
AH+ VL+ SP F E+F + + +V + D+ + LL+FMY + +EE
Sbjct: 174 AHRCVLAAQSPVFSAELFGPMKDSDRAGVVRIDDMEAQVFKALLRFMYTDSLPEMEEE 231
>04_04_1220 + 31843628-31844755
Length = 375
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVT-LAAEXLMQAHKLVLSVCSPYFQ-EMF---KMNPTQHPIV 340
++M +L GD DV L + +AH+ VL+ SP F+ E+F M + V
Sbjct: 184 SDMRRHMANMLRGGDGADVVVLVRDQPFRAHRCVLAARSPVFRAELFGGGHMRERRTSCV 243
Query: 341 FLKDVSHSALRDLLQFMY 394
+ D+ S L F+Y
Sbjct: 244 VVDDMEPSIFSAFLHFIY 261
>10_08_0125 - 15000650-15001717
Length = 355
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVT-LAAEXLMQAHKLVLSVCSPYFQ-EMFKMNPTQH---PIV 340
+NM F LL + DV L + AH+LVL+ SP F+ E+F PT+ +
Sbjct: 159 SNMHLYFGDLLVSKEGTDVKFLVGGEMFAAHRLVLAARSPVFKAELF--GPTKKGTIDAI 216
Query: 341 FLKDVSHSALRDLLQFMY 394
+ ++ + LL+F+Y
Sbjct: 217 QIDNMEARVFKALLEFIY 234
>04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072
Length = 414
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 284 CSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN-VKQEEL 427
C P + F T++P+VFL+ + + DLLQ + V+ K+ EL
Sbjct: 253 CEPRKEIFFTERNTENPLVFLRFLVSTPWGDLLQIKFSRRVHRTKRLEL 301
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,474,701
Number of Sequences: 37544
Number of extensions: 327135
Number of successful extensions: 813
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -