Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0305
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 49 4e-06
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 49 4e-06
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 48 9e-06
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 48 9e-06
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 45 6e-05
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 44 1e-04
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 38 0.005
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 38 0.005
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 37 0.012
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 37 0.012
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 37 0.012
AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical ... 37 0.016
L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical pr... 35 0.049
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 35 0.049
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 30 1.8
Z69383-1|CAA93412.1| 409|Caenorhabditis elegans Hypothetical pr... 29 2.4
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 28 7.4
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 28 7.4
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 28 7.4
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 28 7.4
AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical... 27 9.8
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 48.8 bits (111), Expect = 4e-06
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +2
Query: 194 FHGLLSRGDLVDVTLAAEXL-MQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHS 364
F+ L S+ L DV L E + AHK++L+ PYF+ MF ++ + + + ++D+++
Sbjct: 41 FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYE 100
Query: 365 ALRDLLQFMYQGEVNVKQEELASFISTA---EQLQVKGXXGNQNEESSTPSNQSRLR 526
+ LL F Y GE+ + + S + A + L+V GN PSN +R
Sbjct: 101 TVDALLSFAYTGELRITTSNVQSIMLGANFFQMLEVVQHCGNFLLTRLHPSNALSIR 157
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +2
Query: 200 GLLSRGDLVDVTLAAEXL-MQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSAL 370
GL +R L DVTL + AH++VLS CSPYF MF +M + ++++ L
Sbjct: 48 GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTL 107
Query: 371 RDLLQFMYQGEVNVKQEELASFISTAEQLQV 463
L++F Y G + + + + A LQ+
Sbjct: 108 EALIEFCYTGAIAIDDSNVQDILPAACLLQI 138
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 427
+ AH+++LS S YF+ MF + + I+ +K+V L L+ +MY G + + ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 428 ASFISTAEQLQV 463
+ ++TA LQ+
Sbjct: 142 QTILATASLLQL 153
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 427
+ AH+++LS S YF+ MF + + I+ +K+V L L+ +MY G + + ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 428 ASFISTAEQLQV 463
+ ++TA LQ+
Sbjct: 142 QTILATASLLQL 153
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Frame = +2
Query: 194 FHGLLSRGDLVDVTLAAEXL-MQAHKLVLSVCSPYFQEMFKMNPTQHPIVFL----KDVS 358
F+ L S+ L DV L E + AHK++L+ PYF+ MF ++ + + + D++
Sbjct: 41 FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMN 100
Query: 359 HSALRDLLQFMYQGEVNVKQEELASFISTA---EQLQVKGXXGNQNEESSTPSNQSRLR 526
+ + LL F Y GE+ + + S + A + L+V GN PSN +R
Sbjct: 101 YETVDALLSFAYTGELRITTSNVQSIMLGANFFQMLEVVQHCGNFLLTRLHPSNALSIR 159
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 218 DLVDVTL-AAEXLMQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQF 388
+L DV L A +++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168
Query: 389 MYQGEVNVKQEELASFISTAEQLQV 463
+Y ++ + + I TA LQ+
Sbjct: 169 IYTDKIAITMNNVHQLIFTATVLQM 193
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 218 DLVDVTL-AAEXLMQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQF 388
+L DV L A +++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168
Query: 389 MYQGEVNVKQEELASFISTAEQLQV 463
+Y ++ + + I TA LQ+
Sbjct: 169 IYTDKIAITMNNVHQLIFTATVLQM 193
>Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical
protein F38H4.7 protein.
Length = 602
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +2
Query: 260 AHKLVLSVCSPYFQEMFK--MNP--TQHPI-VFLKDVSHSALRDLLQFMYQGEVNVKQEE 424
AHK VLS+ S F MF + P T+ + + L DV SA LL+F+Y EV ++ E
Sbjct: 206 AHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEAES 265
Query: 425 LASFISTAEQLQV 463
+ + + TA++ V
Sbjct: 266 VMTTLYTAKKYAV 278
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVTLAAEXL-MQAHKLVLSVCSPYFQEMFKMNPT--QHPIVFL 346
++++ L G D TL E ++AHK +L+ SP F M + + Q+ L
Sbjct: 187 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 246
Query: 347 KDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKG 469
+D+ + ++ +L ++Y G ++ AE+ + G
Sbjct: 247 RDIDYEVVQAILYYIYTGTCTNMGGNALDILAAAERFALPG 287
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +2
Query: 176 ANMSAGFHGLLSRGDLVDVTLAAEXL-MQAHKLVLSVCSPYFQEMFKMNPT--QHPIVFL 346
++++ L G D TL E ++AHK +L+ SP F M + + Q+ L
Sbjct: 194 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 253
Query: 347 KDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKG 469
+D+ + ++ +L ++Y G ++ AE+ + G
Sbjct: 254 RDIDYEVVQAILYYIYTGTCTNMGGNALDILAAAERFALPG 294
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 37.1 bits (82), Expect = 0.012
Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Frame = +2
Query: 122 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEXL-MQAHKLVL 277
+ ++AS E LC F + H L R G DV + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 278 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 457
+ SPYF +FK + + S L +MY G V + + ++ + A
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNF 120
Query: 458 QV 463
+
Sbjct: 121 LI 122
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 37.1 bits (82), Expect = 0.012
Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Frame = +2
Query: 122 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEXL-MQAHKLVL 277
+ ++AS E LC F + H L R G DV + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 278 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 457
+ SPYF +FK + + S L +MY G V + + ++ + A
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNF 120
Query: 458 QV 463
+
Sbjct: 121 LI 122
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 37.1 bits (82), Expect = 0.012
Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Frame = +2
Query: 122 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEXL-MQAHKLVL 277
+ ++AS E LC F + H L R G DV + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 278 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 457
+ SPYF +FK + + S L +MY G V + + ++ + A
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNF 120
Query: 458 QV 463
+
Sbjct: 121 LI 122
>AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical
protein Y75B12B.4 protein.
Length = 320
Score = 36.7 bits (81), Expect = 0.016
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +2
Query: 221 LVDVTLAAEXL-MQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLK--DVSHSALRDLLQFM 391
L DV L E + K VL+ S +FQ+MF N + +K DV+HS DLL +
Sbjct: 159 LTDVVLVLEGKHVHVGKQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVI 218
Query: 392 YQGEVNVKQEELASFISTAEQLQV 463
Y + + ++ + +++ V
Sbjct: 219 YPTHMLINSSNVSHLLKLSDRFAV 242
>L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical
protein C50C3.8 protein.
Length = 410
Score = 35.5 bits (78), Expect = 0.037
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFK---MNPTQHPIVFLKDVSHSALRDLLQFMYQG--EVNVKQ 418
++AH+ +L SP F+ MF M Q + ++D + ++R +++FMY G E Q
Sbjct: 230 IKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMYTGATESLESQ 289
Query: 419 EELASFISTAEQLQV 463
+ ++ A++ +V
Sbjct: 290 GNIDEILAIADKYEV 304
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 35.1 bits (77), Expect = 0.049
Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +2
Query: 119 VVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEX-LMQAHKLVLSVCSPY 295
V I ++E N + + L S+ L D + +++AHK VL+ SP
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225
Query: 296 FQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTA 448
F M T + ++++ D+ + + +++ ++Y G N ++A+ + A
Sbjct: 226 FNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMATALLIA 279
>Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical
protein F27C8.5 protein.
Length = 565
Score = 35.1 bits (77), Expect = 0.049
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 263 HKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIS 442
H +V+ S F E F + + D ++R + +MY GE+++ + +A ++
Sbjct: 49 HSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGEIDIPETTIADVLA 108
Query: 443 TAEQLQV 463
A L+V
Sbjct: 109 VASYLRV 115
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 35.1 bits (77), Expect = 0.049
Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +2
Query: 119 VVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEX-LMQAHKLVLSVCSPY 295
V I ++E N + + L S+ L D + +++AHK VL+ SP
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225
Query: 296 FQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTA 448
F M T + ++++ D+ + + +++ ++Y G N ++A+ + A
Sbjct: 226 FNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMATALLIA 279
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 197 HGLLSRGDLVDVTLAAEXLMQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRD 376
H LLSR DL+ + + A+ MQ +L + S YF+ T+H V + LRD
Sbjct: 597 HTLLSRFDLIFLIVDAQDEMQDRRLGNHLVSLYFENDGNQEKTEH-------VDMNLLRD 649
Query: 377 LLQFMYQGEVNVK-QEELASFI 439
+ + + ++ K EE + FI
Sbjct: 650 YIAYA-KANIHPKLSEEASQFI 670
>Z69383-1|CAA93412.1| 409|Caenorhabditis elegans Hypothetical
protein F13E9.4 protein.
Length = 409
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 476 GNQNEESST--PSNQSRLRGQAPGRHNKDNSVMT 571
GN N+ SS+ +NQ R +GQ G + NSVM+
Sbjct: 182 GNNNQGSSSGYQNNQGRHQGQGGGHSSSSNSVMS 215
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 416 QEELASFISTAEQLQVKGXXGNQNEESSTPSNQSRLRGQAPGRHNKDNSVMTKLETD 586
Q++ SF+ E L + N++ TP N S +A R + N V ++E D
Sbjct: 657 QQDKGSFVMEEEMLSLHEPETGSNKKKLTPKNPS---FEATSRQVRTNDVFERIEHD 710
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 416 QEELASFISTAEQLQVKGXXGNQNEESSTPSNQSRLRGQAPGRHNKDNSVMTKLETD 586
Q++ SF+ E L + N++ TP N S +A R + N V ++E D
Sbjct: 657 QQDKGSFVMEEEMLSLHEPETGSNKKKLTPKNPS---FEATSRQVRTNDVFERIEHD 710
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 416 QEELASFISTAEQLQVKGXXGNQNEESSTPSNQSRLRGQAPGRHNKDNSVMTKLETD 586
Q++ SF+ E L + N++ TP N S +A R + N V ++E D
Sbjct: 657 QQDKGSFVMEEEMLSLHEPETGSNKKKLTPKNPS---FEATSRQVRTNDVFERIEHD 710
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +2
Query: 383 QFMYQGEVNVKQEELASFISTAEQLQVKGXXGNQNEESSTPSNQSRLRGQAPGRHNKDNS 562
Q ++Q ++N +Q + + +Q Q QN+ + + + QAPG ++ +S
Sbjct: 1026 QMLHQSQMNYQQVQQVQQVQHVQQQQ-----NLQNQHHHQQQHHQQNQQQAPGNRSRSHS 1080
Query: 563 VMTKLETDLDSKPS 604
+ K+E + + S
Sbjct: 1081 NVGKMEQEAQRQGS 1094
>AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical
protein Y54F10AM.11 protein.
Length = 286
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +2
Query: 230 VTLAAEXLMQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN 409
+ + E K L+ S FQ +F P P + ++DVS L+FMY
Sbjct: 17 IVVVEERKFHVGKQYLATHSRVFQSLFA-TPGD-PEITIQDVSSEDFLKFLEFMYHNTDQ 74
Query: 410 VKQEELASFISTAEQLQV 463
+ + + S ++ + + V
Sbjct: 75 ITAQNVESLLTVSARFGV 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,319,805
Number of Sequences: 27780
Number of extensions: 294322
Number of successful extensions: 676
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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