Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0303
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022975-5|AAB70672.1| 292|Caenorhabditis elegans Serpentine re... 29 4.4
Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical pr... 28 5.8
L23646-9|AAM48529.1| 379|Caenorhabditis elegans Hypothetical pr... 28 5.8
L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical pr... 28 5.8
L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical pr... 28 5.8
L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain fami... 28 5.8
>AF022975-5|AAB70672.1| 292|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 13 protein.
Length = 292
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -3
Query: 575 REIVDCLRQITVAVKQILELVFALETSSALCFQSLTCQYLSPSTILSSTSRII--FIMMS 402
R ++D + + VAV I + ++L Q+L P++ + + I+ FI +
Sbjct: 43 RFLLDVILSVLVAVFLICGIFYSLFPEPLPLLQTLIFYLSLPASNIYAVRSILILFISVE 102
Query: 401 RILILYFPV 375
R++ +YFP+
Sbjct: 103 RVIAVYFPI 111
>Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical
protein C47E12.4d protein.
Length = 292
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 495 GRLQSEYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPM-VKAIVSKIIHE 653
G+ +E+ F F NR+ A+ + D N W+ + +E P + + V + +H+
Sbjct: 206 GKPANEFAFNGEFK-NREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQ 258
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 495 GRLQSEYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPM-VKAIVSKIIHE 653
G+ +E+ F F NR+ A+ + D N W+ + +E P + + V + +H+
Sbjct: 320 GKPANEFAFNGEFK-NREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQ 372
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 495 GRLQSEYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPM-VKAIVSKIIHE 653
G+ +E+ F F NR+ A+ + D N W+ + +E P + + V + +H+
Sbjct: 321 GKPANEFAFNGEFK-NREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQ 373
>Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical
protein C47E12.4a protein.
Length = 338
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 495 GRLQSEYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPM-VKAIVSKIIHE 653
G+ +E+ F F NR+ A+ + D N W+ + +E P + + V + +H+
Sbjct: 252 GKPANEFAFNGEFK-NREYAEKVIDETNEYWKTLIKEANPSLNTVSRVPEAVHQ 304
>L23646-9|AAM48529.1| 379|Caenorhabditis elegans Hypothetical
protein F44E2.7b protein.
Length = 379
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 579 SNWREIFQEVAPPMVKAIVSKIIHETFK 662
S WREI + P V A+V KI+ E+ K
Sbjct: 143 SRWREIESDSDKPEVTALVKKILEESKK 170
>L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical
protein F44E2.7c protein.
Length = 411
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 579 SNWREIFQEVAPPMVKAIVSKIIHETFK 662
S WREI + P V A+V KI+ E+ K
Sbjct: 175 SRWREIESDSDKPEVTALVKKILEESKK 202
>L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical
protein F44E2.7a protein.
Length = 471
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 579 SNWREIFQEVAPPMVKAIVSKIIHETFK 662
S WREI + P V A+V KI+ E+ K
Sbjct: 235 SRWREIESDSDKPEVTALVKKILEESKK 262
>L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical
protein F44E2.7d protein.
Length = 469
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 579 SNWREIFQEVAPPMVKAIVSKIIHETFK 662
S WREI + P V A+V KI+ E+ K
Sbjct: 233 SRWREIESDSDKPEVTALVKKILEESKK 260
>AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain family
protein 7 protein.
Length = 778
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 554 EDNPRFREQQLAGNLSGGGSSHGQGYRLQDNSRNIQTVR*GAYQGSSH 697
+D +F+EQ + G +GQGY Q + N Q + Y G +
Sbjct: 37 DDQNQFQEQDYGNEQNYGNQDYGQGYGNQQDYGNQQDYQQQNYGGGGY 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,263,756
Number of Sequences: 27780
Number of extensions: 343342
Number of successful extensions: 1094
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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