Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0303
(718 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 35 7e-04
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 23 2.9
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 23 2.9
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 5.0
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 22 5.0
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 22 6.7
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 6.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 6.7
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 6.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 8.8
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 35.1 bits (77), Expect = 7e-04
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = +3
Query: 516 QFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPPMVKA---IVSKIIHETFKL--FDKV 677
+F+NLF+GN++L + ++ F N N +F+E+ + + +KI +E F FDK+
Sbjct: 191 RFENLFDGNKELGEQMNRFINENSELLFKELQAAYEETFSLVFTKIDNEIFNRVPFDKI 249
Score = 28.3 bits (60), Expect = 0.077
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 316 VTLVGEYTLGGQLLILPIEGTGK 384
V V +Y + G++L+LP+ G GK
Sbjct: 125 VDFVADYKIEGKVLLLPVRGAGK 147
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 23.0 bits (47), Expect = 2.9
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = -1
Query: 406 CPG---F*SCTFRCLRWVVSVVGHPTCI 332
CP F C RC R+ +VV P CI
Sbjct: 37 CPSNEIFSRCDGRCQRFCPNVVPKPLCI 64
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 23.0 bits (47), Expect = 2.9
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = -1
Query: 406 CPG---F*SCTFRCLRWVVSVVGHPTCI 332
CP F C RC R+ +VV P CI
Sbjct: 37 CPSNEIFSRCDGRCQRFCPNVVPKPLCI 64
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +3
Query: 492 RGRLQSEYQFQNLFNGNRDLAKTIHDFANSNWREIFQEVAPP 617
RGR + N++N + + + SN+RE+ + + P
Sbjct: 365 RGRDANRQNSCNIYNASSRMENNLRGETQSNYREMEKRQSVP 406
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 22.2 bits (45), Expect = 5.0
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = +2
Query: 125 PFLAAGIADLGIETMDPMTVGR 190
PFL++ ++ + + + P T+GR
Sbjct: 4 PFLSSSVSTVIVTALTPSTLGR 25
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1
Query: 655 HSNCSIRCLSR 687
HS C+IRCL++
Sbjct: 78 HSACAIRCLAQ 88
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.8 bits (44), Expect = 6.7
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 354 TDTTHRRHRKVQDQNPGHHNED 419
T H+ H K + +N H N+D
Sbjct: 50 TSQPHQDHNKEKSKNNHHCNQD 71
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 6.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 380 PVPSMGSISSWPPNVYSPTSV 318
P+P+M ++S PP P S+
Sbjct: 419 PIPNMSNMSGMPPLPNMPGSM 439
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 165 VSIPRSAIPAARNGTAFCAEDFRQAVSFGRHGVINFAKSV 46
++ P + P G +DF + S GV+ FAK +
Sbjct: 217 LACPLNPNPQPLTGQQELLQDFSKRFSPAIRGVVEFAKRI 256
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +3
Query: 336 HVGWPTTDTTHRRHRKVQDQNPGHHNED 419
+V PT ++ V +PG HN D
Sbjct: 105 NVAVPTKSILEKKPELVDATDPGEHNGD 132
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 17 FACAFVASDATDLAKFITPCRPK 85
FA VAS +LA F+ RPK
Sbjct: 646 FAMIIVASYTANLAAFLVLERPK 668
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/55 (25%), Positives = 21/55 (38%)
Frame = -3
Query: 350 WPPNVYSPTSVTEHFRSRRVLSCNRLKFKTTQSLGL*RSCL*NPCASQPGRCSPG 186
W + ++ ++R + N L TT SL + N PGR PG
Sbjct: 868 WRGAIEKRKTLRASIAAQRRIQSNGLNDPTTVSLAVDTVARSNVTPRSPGRAWPG 922
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,964
Number of Sequences: 438
Number of extensions: 4435
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -