Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0301
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.54 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.9  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 49  IEFFVKTYT*SIFGIVYLYSCNIPF 123
           I FF +  T  IF +VY+Y C+  F
Sbjct: 143 ILFFAQGLTSPIFNLVYVYCCDNNF 167


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -2

Query: 268 FNSLNRAVQTTYIPLQANYIYYKSW 194
           FN  N A++  Y P   + +  ++W
Sbjct: 258 FNDFNEAIKEAYFPKLDSLVSSRAW 282


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 459 FLNIYIITPLIKHNTHT 509
           F NI++ITP    N +T
Sbjct: 414 FFNIFLITPFYNFNENT 430


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 521 F*YESVSVMFDKWCDYVNVQECMQDGPC 438
           F Y + ++M ++W +  N+Q    D PC
Sbjct: 594 FRYGNGALMINQWENVTNIQCPNADLPC 621


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 521 F*YESVSVMFDKWCDYVNVQECMQDGPC 438
           F Y + ++M ++W +  N+Q    D PC
Sbjct: 594 FRYGNGALMINQWENVTNIQCPNADLPC 621


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 57  FCQNIYLINIWYSLSL 104
           FC +IY+  +W + S+
Sbjct: 82  FCASIYVGTVWINTSI 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,171
Number of Sequences: 336
Number of extensions: 2900
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)