Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0301
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81583-4|CAB04669.1|  323|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z93778-8|CAB07848.4|  437|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL034364-5|CAA22255.4|  437|Caenorhabditis elegans Hypothetical ...    29   2.9  
AF136150-1|AAF61419.1|  437|Caenorhabditis elegans homogentisate...    29   2.9  
Z73905-4|CAI91175.1|  536|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z83319-2|CAB05904.2|  433|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U95181-1|AAD00776.1|  437|Caenorhabditis elegans 2,5 dihydroxyph...    28   6.7  

>Z81583-4|CAB04669.1|  323|Caenorhabditis elegans Hypothetical
           protein T02G6.4 protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = -3

Query: 372 LATLLFLYCNLKRI*IIQSVLVVKQLQFTQDSFSFLIL*TGLSKLHTYLCRLIIFTTKAG 193
           L  LL ++CN      +++ ++V++      SF+F +L TGL+++      L  F  K  
Sbjct: 153 LLKLLLIFCNFDFF--VETFVLVRRKYLMFQSFNFSVLITGLNQIKFPFLYLPSFRVKTN 210

Query: 192 G 190
           G
Sbjct: 211 G 211


>Z93778-8|CAB07848.4|  437|Caenorhabditis elegans Hypothetical
           protein W06D4.1 protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 277 FLFFNSLNRAVQTTYIPLQANYIYYKSWRTADKYF 173
           F+F +SLN A+    +    +  YYK W+   K+F
Sbjct: 399 FMFESSLNMAITNWAVYQNVDKDYYKDWQPLKKHF 433


>AL034364-5|CAA22255.4|  437|Caenorhabditis elegans Hypothetical
           protein W06D4.1 protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 277 FLFFNSLNRAVQTTYIPLQANYIYYKSWRTADKYF 173
           F+F +SLN A+    +    +  YYK W+   K+F
Sbjct: 399 FMFESSLNMAITNWAVYQNVDKDYYKDWQPLKKHF 433


>AF136150-1|AAF61419.1|  437|Caenorhabditis elegans homogentisate
           1,2-dioxygenase protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 277 FLFFNSLNRAVQTTYIPLQANYIYYKSWRTADKYF 173
           F+F +SLN A+    +    +  YYK W+   K+F
Sbjct: 399 FMFESSLNMAITNWAVYQNVDKDYYKDWQPLKKHF 433


>Z73905-4|CAI91175.1|  536|Caenorhabditis elegans Hypothetical
           protein C32C4.7 protein.
          Length = 536

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 462 LNIYIITPLIKHNTHTFILKHSDTSQAHTH 551
           +N  +  PL  H+ HTF+ K +DT     H
Sbjct: 22  VNFLVYCPLFAHSHHTFLAKIADTLSEEGH 51


>Z83319-2|CAB05904.2|  433|Caenorhabditis elegans Hypothetical
           protein T02D1.6 protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 393 TFILGHVLATLLFLYCNLKRI 331
           TFILG+V+  +L +Y NLK I
Sbjct: 247 TFILGYVVPLILIVYFNLKLI 267


>U95181-1|AAD00776.1|  437|Caenorhabditis elegans 2,5
           dihydroxyphenylacetate oxidase protein.
          Length = 437

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 277 FLFFNSLNRAVQTTYIPLQANYIYYKSWRTADKYF 173
           F+F +SLN A+    +    +  YYK W+   K++
Sbjct: 399 FMFESSLNMAITNWAVYQNVDKDYYKDWQPLKKHY 433


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,380,824
Number of Sequences: 27780
Number of extensions: 251359
Number of successful extensions: 561
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)