Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0300
         (409 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   2.0  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   4.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   4.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    20   8.1  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = -2

Query: 258 YAFCLCFFNSR 226
           ++FC C++NS+
Sbjct: 270 FSFCYCYYNSK 280


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 312 FYLNLLSGPPHDAVLDCDYAFCLCFFNSR 226
           F+L   SG PH A L  +      F NS+
Sbjct: 36  FWLAAASGAPHPAALPIEGCNETGFINSQ 64


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 312 FYLNLLSGPPHDAVLDCDYAFCLCFFNSR 226
           F+L   SG PH A L  +      F NS+
Sbjct: 36  FWLAAASGAPHPAALPIEGCNETGFINSQ 64


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -2

Query: 366 IPLYVQFLYFTDIQFLFAFYLNLL 295
           +P+YV +L     Q  F F++ ++
Sbjct: 174 LPVYVSYLLIFVQQIPFCFFVRVI 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,903
Number of Sequences: 336
Number of extensions: 1391
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)