Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0300
         (409 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical pr...    29   1.7  
U50300-7|AAC48106.1|  645|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z73908-5|CAA98129.2|  325|Caenorhabditis elegans Hypothetical pr...    28   2.3  
CU457740-6|CAM36336.1|  365|Caenorhabditis elegans Hypothetical ...    28   2.3  
AC024882-4|AAF60933.2|  338|Caenorhabditis elegans Seven tm rece...    27   5.2  
Z74043-7|CAA98539.2|  705|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z48045-1|CAA88103.2|  630|Caenorhabditis elegans Hypothetical pr...    26   9.1  

>Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical
           protein T09F5.16 protein.
          Length = 311

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 353 FSFSILRISNFSSPFILIFFLDLHTMLF*TVTMLFVYVSLILVISCPLLKSSLHQXNHLV 174
           F  SI +I   ++ +IL FF  L    F      FV++  +L+I  PL+   +H  N  +
Sbjct: 51  FYKSIKKIQIVNAIYILYFFFTLFMAFFGAT--FFVFLIPVLLIVFPLVTGLMHDVNEFL 108


>U50300-7|AAC48106.1|  645|Caenorhabditis elegans Hypothetical
           protein R03H4.5 protein.
          Length = 645

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 371 ILYPFTFSFSILRISNFSSPFILIFFLDLHT 279
           IL  F F+F  LR+  FSS FI++F+  + +
Sbjct: 184 ILDKFAFNFLFLRMWQFSSGFIVLFWTKIRS 214


>Z73908-5|CAA98129.2|  325|Caenorhabditis elegans Hypothetical
           protein F53B2.4 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
 Frame = -3

Query: 395 RLSNFI--FFILYPFTFSFSIL 336
           RLSNF   F  LYPF F+FS++
Sbjct: 151 RLSNFAIPFIYLYPFIFTFSLI 172


>CU457740-6|CAM36336.1|  365|Caenorhabditis elegans Hypothetical
           protein C50E10.6 protein.
          Length = 365

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -2

Query: 381 HIFYSIPLYVQFLYFTDIQFLFAFYLNLLSGPPHDAVLDCDYAFCLCFFNSRYILSI 211
           ++ + + ++ QFL  T + FLF   L  +       VL+   AF +C    RY L I
Sbjct: 167 YLLFFLIIFQQFLIITAVYFLFYNRLKFIPAVTLLTVLNV-LAFTICLLIQRYNLKI 222


>AC024882-4|AAF60933.2|  338|Caenorhabditis elegans Seven tm
           receptor protein 158 protein.
          Length = 338

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
 Frame = -3

Query: 401 YHRLSNFIF--FILYPFTFSFSILRISNFSSPFILIFFLDLHTMLF*T------VTMLFV 246
           Y  L  F+   F +  +    S L+I N +S     F   L   L+        + MLF+
Sbjct: 205 YFALKGFMMIPFCIIIYCGVMSYLKIKNLNSQGESEFSKRLQVQLYKALIAQFLIPMLFL 264

Query: 245 YVSLILVISCPLLKSSLHQXNHLV 174
           ++     ISCPL K  +   N ++
Sbjct: 265 FLPTSTFISCPLFKLDISWMNRII 288


>Z74043-7|CAA98539.2|  705|Caenorhabditis elegans Hypothetical
           protein T19B10.5 protein.
          Length = 705

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -3

Query: 326 NFSSPFILIFFLDLHTMLF*TVTMLFVYVSLILVISCPLLKSS 198
           + SS F+L F +  + +LF  V + + +  L  +IS   LK +
Sbjct: 30  DISSLFVLPFLISRNALLFFNVFLYYFFTDLAQIISRKSLKET 72


>Z48045-1|CAA88103.2|  630|Caenorhabditis elegans Hypothetical
           protein C41C4.3 protein.
          Length = 630

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +1

Query: 190 WWSEDLSNGQDITRIKET*TKSIVTV*NSIVWRSRKKIKIKGEEKLDIRKIEKLNVK-GY 366
           W SEDL    ++ R++     S+ ++ NS+V   R   +I     + +  ++    K GY
Sbjct: 530 WISEDLFVNLNLQRLRMGQPSSMTSIPNSLVAFMRTASQIMYSTPISLNSVDIYKRKIGY 589

Query: 367 RIKN 378
           RI +
Sbjct: 590 RISS 593


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,389,463
Number of Sequences: 27780
Number of extensions: 122897
Number of successful extensions: 410
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)