Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0300
         (409 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   3.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   3.1  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   3.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   3.1  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   3.1  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   7.1  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   7.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               20   9.4  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    20   9.4  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 373 LFYTPLRSVSLFY 335
           L+Y+P+ S SL+Y
Sbjct: 265 LYYSPVASTSLYY 277


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 373 LFYTPLRSVSLFY 335
           L+Y+PL S SL+Y
Sbjct: 266 LYYSPLTSHSLYY 278


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 373 LFYTPLRSVSLFY 335
           L+Y+P+ S SL+Y
Sbjct: 265 LYYSPVASTSLYY 277


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 373 LFYTPLRSVSLFY 335
           L+Y+PL S SL+Y
Sbjct: 266 LYYSPLSSRSLYY 278


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 373 LFYTPLRSVSLFY 335
           L+Y+P+ S SL+Y
Sbjct: 265 LYYSPVASTSLYY 277


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 277 IVWRSRKKIKIKGEEKLDIRKIEKLNVK 360
           I++ SR    I+  EK+   + +K+NVK
Sbjct: 237 ILFYSRLLSSIRNHEKMLREQAKKMNVK 264


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 277 IVWRSRKKIKIKGEEKLDIRKIEKLNVK 360
           I++ SR    I+  EK+   + +K+NVK
Sbjct: 237 ILFYSRLLSSIRNHEKMLREQAKKMNVK 264


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 390 K*FHIFYSIPLYVQFLYF 337
           K +H F+ + + + FLYF
Sbjct: 3   KNYHFFFILVITLIFLYF 20


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 373 LFYTPLRSVSLFY 335
           L+Y+PL S  L+Y
Sbjct: 263 LYYSPLASHGLYY 275


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,925
Number of Sequences: 438
Number of extensions: 1608
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)