Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0299
         (394 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   0.47 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    24   0.62 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   0.82 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   3.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   5.8  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   5.8  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   7.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   7.6  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.2 bits (50), Expect = 0.47
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 134 W*SFYDFLPWV 102
           W +FYD+ PWV
Sbjct: 487 WHTFYDYRPWV 497


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.8 bits (49), Expect = 0.62
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +2

Query: 80  TWNT*SGRPMEENRRSFTTGFHMAFPKKLRCLSGGGLAELDHK 208
           T+ T + + M    + F        P+KLR   GG   E+++K
Sbjct: 91  TFETAAHKIMAGATKRFRNQIEALVPRKLRLADGGKTLEINYK 133


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 0.82
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 85   PSVVHAAYQIPPPSNLDAQGMTLPYS 8
            P  VH++  +PPP +   Q +  P S
Sbjct: 1796 PPSVHSSTVVPPPQHSTTQSLVDPKS 1821


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 10/39 (25%), Positives = 15/39 (38%)
 Frame = +2

Query: 278 DCAKLMSELLKTHPVSVQEELTSYCVSLLXXDEARRCAC 394
           +C K+   +  THP     +   Y    +  D  RR  C
Sbjct: 171 ECPKVNETVAATHPRYADPDDCQYFYVCINGDTPRRSGC 209


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +1

Query: 163 TALPIRRGS--GRT*SQRASMTSCSRPPS 243
           ++LP +R S    T S R+ MTSCS  P+
Sbjct: 82  SSLPTQRTSTSNPTYSSRSVMTSCSSVPT 110


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
          beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 33 ASRLLGGGIWYAACTT 80
          +SR    GIWY  C T
Sbjct: 21 SSRKSDSGIWYWQCNT 36


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 141 SIWHSLRNCVA 173
           SIWHS++  VA
Sbjct: 171 SIWHSVKKTVA 181


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 317 DAFSGARTLI*RSLR 273
           +AF G RTL+ + LR
Sbjct: 15  EAFPGGRTLVEKGLR 29


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 220 TSCSRPPSNWQSTAT 264
           TSC+R  + W  TAT
Sbjct: 110 TSCTRYWTCWNGTAT 124


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 94  SGIPSVVHAAYQIPPPSNLDAQGMT 20
           SG+ +V+  + Q PP  ++  +  T
Sbjct: 783 SGLSAVIQISVQAPPQFDIKLRNQT 807


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,592
Number of Sequences: 336
Number of extensions: 2033
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)