Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0298
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   3.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   3.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.9  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 277 IFKKEILYQSCDRNRGIFLSQVYSQR*TD 363
           IF    +Y  CD N  +FL QV++ R  D
Sbjct: 154 IFNLVYVY-CCDNNFNVFLRQVFTCRCKD 181


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +1

Query: 67  YHWVLLLS*HKMTKLLFRTNRAIAIQVLSRYKSNAAPQTLTTVRIKDKDHI 219
           Y  VLL+       +LFR     A+++LS+       + L  V+I+ K ++
Sbjct: 76  YCSVLLVFLTYFFNILFRKKLLNAVKILSKIDETLNSKPLKPVKIRTKVYL 126


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +1

Query: 67  YHWVLLLS*HKMTKLLFRTNRAIAIQVLSRYKSNAAPQTLTTVRIKDKDHI 219
           Y  VLL+       +LFR     A+++LS+       + L  V+I+ K ++
Sbjct: 72  YCSVLLVFLTYFFNILFRKKLLNAVKILSKIDETLNSKPLKPVKIRTKVYL 122


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -2

Query: 706 TGIKIRAS--KISRSGFITKQLLFAL 635
           TG K+  S  K    GFITKQL+F +
Sbjct: 517 TGGKVETSICKNFCFGFITKQLIFMI 542


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 208 KDHITDEYTNVTPKILLIWVAIYIFKKEIL 297
           K+HI +    +  +    +V IYIF + +L
Sbjct: 48  KEHIFERIRTIYNQFSTPYVGIYIFHQPVL 77



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 324 STIPVARLIKDFLFEDVDCDP 262
           S + +A ++KDF+F+  +  P
Sbjct: 447 SKVALASVVKDFVFDPTERTP 467


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,399
Number of Sequences: 336
Number of extensions: 4203
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)