Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0298
         (734 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058580-1|AAL13809.1|  453|Drosophila melanogaster LD27389p pro...   155   6e-38
AF012089-2|AAB65750.2|  452|Drosophila melanogaster phenylalanyl...   155   6e-38
AE013599-1806|AAF58310.1|  453|Drosophila melanogaster CG13348-P...   155   6e-38
AY051694-1|AAK93118.1|  498|Drosophila melanogaster LD23968p pro...    30   2.8  
AE014298-1133|AAF46332.1|  498|Drosophila melanogaster CG2263-PA...    30   2.8  

>AY058580-1|AAL13809.1|  453|Drosophila melanogaster LD27389p
           protein.
          Length = 453

 Score =  155 bits (376), Expect = 6e-38
 Identities = 73/114 (64%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
 Frame = +2

Query: 317 IVEYFYRRFTH-RGKPTFSVYDNLSPVVSTKQNFDDLLIPNDHPSRLKSDCYYINKDTLL 493
           IV YFY  + + RG P FSVYD ++PVV+ +QNFD+LLIP DH SR KSDCYYIN+  LL
Sbjct: 78  IVNYFYGAYRNQRGNPLFSVYDQMNPVVTVQQNFDNLLIPADHVSRQKSDCYYINQQHLL 137

Query: 494 RAHMTHIKPNY*DLGLDNFLMIGDVYRRDEIDSTHFPVFHQVDAVRLQRKEELF 655
           RAH T  +      GLDNFL++G+VYRRDEIDSTH+PVFHQ DAVRL  K++LF
Sbjct: 138 RAHTTAHQVELISGGLDNFLVVGEVYRRDEIDSTHYPVFHQADAVRLVTKDKLF 191



 Score = 34.3 bits (75), Expect = 0.17
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +3

Query: 255 SYLGRNLHLQKGNPLSIVRQESWNIF 332
           SY+G N HLQ  +PLSI+RQ   N F
Sbjct: 57  SYVGANKHLQTDHPLSIIRQRIVNYF 82


>AF012089-2|AAB65750.2|  452|Drosophila melanogaster phenylalanyl
           tRNA synthetase protein.
          Length = 452

 Score =  155 bits (376), Expect = 6e-38
 Identities = 73/114 (64%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
 Frame = +2

Query: 317 IVEYFYRRFTH-RGKPTFSVYDNLSPVVSTKQNFDDLLIPNDHPSRLKSDCYYINKDTLL 493
           IV YFY  + + RG P FSVYD ++PVV+ +QNFD+LLIP DH SR KSDCYYIN+  LL
Sbjct: 78  IVNYFYGAYRNQRGNPLFSVYDQMNPVVTVQQNFDNLLIPADHVSRQKSDCYYINQQHLL 137

Query: 494 RAHMTHIKPNY*DLGLDNFLMIGDVYRRDEIDSTHFPVFHQVDAVRLQRKEELF 655
           RAH T  +      GLDNFL++G+VYRRDEIDSTH+PVFHQ DAVRL  K++LF
Sbjct: 138 RAHTTAHQVELISGGLDNFLVVGEVYRRDEIDSTHYPVFHQADAVRLVTKDKLF 191



 Score = 34.3 bits (75), Expect = 0.17
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +3

Query: 255 SYLGRNLHLQKGNPLSIVRQESWNIF 332
           SY+G N HLQ  +PLSI+RQ   N F
Sbjct: 57  SYVGANKHLQTDHPLSIIRQRIVNYF 82


>AE013599-1806|AAF58310.1|  453|Drosophila melanogaster CG13348-PA
           protein.
          Length = 453

 Score =  155 bits (376), Expect = 6e-38
 Identities = 73/114 (64%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
 Frame = +2

Query: 317 IVEYFYRRFTH-RGKPTFSVYDNLSPVVSTKQNFDDLLIPNDHPSRLKSDCYYINKDTLL 493
           IV YFY  + + RG P FSVYD ++PVV+ +QNFD+LLIP DH SR KSDCYYIN+  LL
Sbjct: 78  IVNYFYGAYRNQRGNPLFSVYDQMNPVVTVQQNFDNLLIPADHVSRQKSDCYYINQQHLL 137

Query: 494 RAHMTHIKPNY*DLGLDNFLMIGDVYRRDEIDSTHFPVFHQVDAVRLQRKEELF 655
           RAH T  +      GLDNFL++G+VYRRDEIDSTH+PVFHQ DAVRL  K++LF
Sbjct: 138 RAHTTAHQVELISGGLDNFLVVGEVYRRDEIDSTHYPVFHQADAVRLVTKDKLF 191



 Score = 34.3 bits (75), Expect = 0.17
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +3

Query: 255 SYLGRNLHLQKGNPLSIVRQESWNIF 332
           SY+G N HLQ  +PLSI+RQ   N F
Sbjct: 57  SYVGANKHLQTDHPLSIIRQRIVNYF 82


>AY051694-1|AAK93118.1|  498|Drosophila melanogaster LD23968p
           protein.
          Length = 498

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 548 FLMIGDVYRRDEIDSTHFPVFHQVDAV 628
           +  I  V+R + +D+TH   FHQV+ V
Sbjct: 350 YFSIDKVFRNETLDATHLAEFHQVEGV 376



 Score = 28.7 bits (61), Expect = 8.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 365 FSVYDNLSPVVSTKQNFDDLLIPNDHPSRLKSDCYYIN 478
           FS     + V S+  NFD L  P  HP+R   D +++N
Sbjct: 242 FSEMPTNNYVESSFWNFDALYQPQQHPARDAHDTFFVN 279


>AE014298-1133|AAF46332.1|  498|Drosophila melanogaster CG2263-PA
           protein.
          Length = 498

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 548 FLMIGDVYRRDEIDSTHFPVFHQVDAV 628
           +  I  V+R + +D+TH   FHQV+ V
Sbjct: 350 YFSIDKVFRNETLDATHLAEFHQVEGV 376



 Score = 28.7 bits (61), Expect = 8.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 365 FSVYDNLSPVVSTKQNFDDLLIPNDHPSRLKSDCYYIN 478
           FS     + V S+  NFD L  P  HP+R   D +++N
Sbjct: 242 FSEMPTNNYVESSFWNFDALYQPQQHPARDAHDTFFVN 279


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,897,957
Number of Sequences: 53049
Number of extensions: 669534
Number of successful extensions: 1498
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)