Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0298
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132943-13|CAC14396.3| 458|Caenorhabditis elegans Hypothetical... 121 5e-28
AL117207-24|CAB60398.3| 458|Caenorhabditis elegans Hypothetical... 121 5e-28
AB096637-1|BAC76737.1| 458|Caenorhabditis elegans mitochondrial... 121 5e-28
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.6
U70846-2|ABI18146.1| 647|Caenorhabditis elegans Hypothetical pr... 29 2.6
U70846-1|AAB09104.4| 510|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF000263-6|AAO21394.1| 496|Caenorhabditis elegans Phenylalanyl ... 29 2.6
AF000263-5|AAG00015.1| 552|Caenorhabditis elegans Phenylalanyl ... 29 2.6
U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical pr... 28 6.0
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 28 7.9
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 28 7.9
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AL132943-13|CAC14396.3| 458|Caenorhabditis elegans Hypothetical
protein Y60A3A.13 protein.
Length = 458
Score = 121 bits (292), Expect = 5e-28
Identities = 59/123 (47%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Frame = +2
Query: 317 IVEYFYRRFTHRGK--PTFSVYDNLSPVVSTKQNFDDLLIPNDHPSRLKSDCYYINKDTL 490
IV+Y ++ + G P F++ ++ VV+T QNFD LL P DH SR SD YY+N +
Sbjct: 91 IVDYVHQTYRKPGNRSPLFTICESEPRVVTTYQNFDSLLTPEDHVSRRPSDTYYVNHEHC 150
Query: 491 LRAHMTHIKPNY*DLGLDNFLMIGDVYRRDEIDSTHFPVFHQVDAVRLQRKEELFCDKTR 670
LRAH + + N GLD FL+IGDVYRRDE+D TH+P FHQ++ VRL K+EL K
Sbjct: 151 LRAHTSAHQHNLMQSGLDAFLVIGDVYRRDEVDRTHYPCFHQIEGVRLYSKDELLGKKPD 210
Query: 671 SRN 679
+N
Sbjct: 211 GKN 213
>AL117207-24|CAB60398.3| 458|Caenorhabditis elegans Hypothetical
protein Y60A3A.13 protein.
Length = 458
Score = 121 bits (292), Expect = 5e-28
Identities = 59/123 (47%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Frame = +2
Query: 317 IVEYFYRRFTHRGK--PTFSVYDNLSPVVSTKQNFDDLLIPNDHPSRLKSDCYYINKDTL 490
IV+Y ++ + G P F++ ++ VV+T QNFD LL P DH SR SD YY+N +
Sbjct: 91 IVDYVHQTYRKPGNRSPLFTICESEPRVVTTYQNFDSLLTPEDHVSRRPSDTYYVNHEHC 150
Query: 491 LRAHMTHIKPNY*DLGLDNFLMIGDVYRRDEIDSTHFPVFHQVDAVRLQRKEELFCDKTR 670
LRAH + + N GLD FL+IGDVYRRDE+D TH+P FHQ++ VRL K+EL K
Sbjct: 151 LRAHTSAHQHNLMQSGLDAFLVIGDVYRRDEVDRTHYPCFHQIEGVRLYSKDELLGKKPD 210
Query: 671 SRN 679
+N
Sbjct: 211 GKN 213
>AB096637-1|BAC76737.1| 458|Caenorhabditis elegans mitochondrial
phenylalanyl-tRNAsynthetase protein.
Length = 458
Score = 121 bits (292), Expect = 5e-28
Identities = 59/123 (47%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Frame = +2
Query: 317 IVEYFYRRFTHRGK--PTFSVYDNLSPVVSTKQNFDDLLIPNDHPSRLKSDCYYINKDTL 490
IV+Y ++ + G P F++ ++ VV+T QNFD LL P DH SR SD YY+N +
Sbjct: 91 IVDYVHQTYRKPGNRSPLFTICESEPRVVTTYQNFDSLLTPEDHVSRRPSDTYYVNHEHC 150
Query: 491 LRAHMTHIKPNY*DLGLDNFLMIGDVYRRDEIDSTHFPVFHQVDAVRLQRKEELFCDKTR 670
LRAH + + N GLD FL+IGDVYRRDE+D TH+P FHQ++ VRL K+EL K
Sbjct: 151 LRAHTSAHQHNLMQSGLDAFLVIGDVYRRDEVDRTHYPCFHQIEGVRLYSKDELLGKKPD 210
Query: 671 SRN 679
+N
Sbjct: 211 GKN 213
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 359 PTFSVYDNLSPVVSTKQNFDDLLIPNDHPSRL 454
PTF V+ +LS VS + ++P DHP RL
Sbjct: 23 PTFPVHISLSVKVSATHSIGPHVLPIDHPVRL 54
>U70846-2|ABI18146.1| 647|Caenorhabditis elegans Hypothetical
protein D1073.1b protein.
Length = 647
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 67 YHWVLLLS*HKMTKLLFRTNRAIAIQVLSRYKSNAAPQTLTTVRIKDKDHITDEYTNVT 243
YH + L S + L FR ++A ++ +R S +TL +R++++ + +YTN+T
Sbjct: 209 YHRLKLQSFLREKILSFRKRISLAQELQTRRASQETEETL--LRLEERSSLASDYTNMT 265
>U70846-1|AAB09104.4| 510|Caenorhabditis elegans Hypothetical
protein D1073.1a protein.
Length = 510
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 67 YHWVLLLS*HKMTKLLFRTNRAIAIQVLSRYKSNAAPQTLTTVRIKDKDHITDEYTNVT 243
YH + L S + L FR ++A ++ +R S +TL +R++++ + +YTN+T
Sbjct: 209 YHRLKLQSFLREKILSFRKRISLAQELQTRRASQETEETL--LRLEERSSLASDYTNMT 265
>AF000263-6|AAO21394.1| 496|Caenorhabditis elegans Phenylalanyl (f)
trna synthetaseprotein 1, isoform b protein.
Length = 496
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 557 IGDVYRRDEIDSTHFPVFHQVDAVRLQRKEEL 652
I V+R + +D+TH FHQV+ V ++ L
Sbjct: 352 IDRVFRNETLDATHLAEFHQVEGVIAEKNLSL 383
>AF000263-5|AAG00015.1| 552|Caenorhabditis elegans Phenylalanyl (f)
trna synthetaseprotein 1, isoform a protein.
Length = 552
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 557 IGDVYRRDEIDSTHFPVFHQVDAVRLQRKEEL 652
I V+R + +D+TH FHQV+ V ++ L
Sbjct: 408 IDRVFRNETLDATHLAEFHQVEGVIAEKNLSL 439
>U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical
protein T12E12.3 protein.
Length = 818
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 288 LFEDVDCDPNKKYFRSYVRVFVCNMIFIFY 199
LF+DV+ D K+Y + + VF ++ FY
Sbjct: 34 LFDDVNLDLFKQYLQEHESVFTAEQLYEFY 63
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical protein
F13B9.1c protein.
Length = 1609
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 220 TDEYTNVTPKILLIWVAIYIFKKEILYQSCD 312
TD Y T IW +Y+FK + L + CD
Sbjct: 1219 TDAYRYCTEVARAIWNNLYLFKADDLLELCD 1249
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical protein
F13B9.1b protein.
Length = 1614
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 220 TDEYTNVTPKILLIWVAIYIFKKEILYQSCD 312
TD Y T IW +Y+FK + L + CD
Sbjct: 1219 TDAYRYCTEVARAIWNNLYLFKADDLLELCD 1249
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical protein
F13B9.1a protein.
Length = 1632
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 220 TDEYTNVTPKILLIWVAIYIFKKEILYQSCD 312
TD Y T IW +Y+FK + L + CD
Sbjct: 1241 TDAYRYCTEVARAIWNNLYLFKADDLLELCD 1271
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,021,737
Number of Sequences: 27780
Number of extensions: 368424
Number of successful extensions: 855
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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