Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0297
         (313 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr...    31   0.17 
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr...    31   0.17 
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p...    31   0.17 
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p...    31   0.17 
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane...    31   0.17 
Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical pr...    30   0.30 
Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical pr...    30   0.30 
AF031841-1|AAC13677.1|  601|Caenorhabditis elegans GLY7 protein.       28   1.6  
AC006774-7|AAF60620.1|  601|Caenorhabditis elegans Glycosylation...    28   1.6  
U53150-1|AAA96123.2|  302|Caenorhabditis elegans Serpentine rece...    27   3.6  
U00046-10|AAC47049.3|  958|Caenorhabditis elegans Hypothetical p...    26   4.8  
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    26   6.4  
AL132948-12|CAD31814.1|  283|Caenorhabditis elegans Hypothetical...    25   8.4  

>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
            K08E5.3b protein.
          Length = 3183

 Score = 31.1 bits (67), Expect = 0.17
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 142  VCARVHGPENDACKPQDAKQSEQLVPVAPAGLXALCDA-VPSCTQTSLTLCRS 297
            +C+ V+GPE   CK +D    E   P+   G   +C   +  C   SL  C S
Sbjct: 1998 ICSEVNGPEKYTCKCRDGYTDESPDPLRRPG--RICKGLINECLDRSLNDCHS 2048


>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
            K08E5.3a protein.
          Length = 3767

 Score = 31.1 bits (67), Expect = 0.17
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 142  VCARVHGPENDACKPQDAKQSEQLVPVAPAGLXALCDA-VPSCTQTSLTLCRS 297
            +C+ V+GPE   CK +D    E   P+   G   +C   +  C   SL  C S
Sbjct: 2582 ICSEVNGPEKYTCKCRDGYTDESPDPLRRPG--RICKGLINECLDRSLNDCHS 2632


>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
            protein K08E5.3b protein.
          Length = 3183

 Score = 31.1 bits (67), Expect = 0.17
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 142  VCARVHGPENDACKPQDAKQSEQLVPVAPAGLXALCDA-VPSCTQTSLTLCRS 297
            +C+ V+GPE   CK +D    E   P+   G   +C   +  C   SL  C S
Sbjct: 1998 ICSEVNGPEKYTCKCRDGYTDESPDPLRRPG--RICKGLINECLDRSLNDCHS 2048


>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
            protein K08E5.3a protein.
          Length = 3767

 Score = 31.1 bits (67), Expect = 0.17
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 142  VCARVHGPENDACKPQDAKQSEQLVPVAPAGLXALCDA-VPSCTQTSLTLCRS 297
            +C+ V+GPE   CK +D    E   P+   G   +C   +  C   SL  C S
Sbjct: 2582 ICSEVNGPEKYTCKCRDGYTDESPDPLRRPG--RICKGLINECLDRSLNDCHS 2632


>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
            adhesion receptorMUA-3 precursor protein.
          Length = 3767

 Score = 31.1 bits (67), Expect = 0.17
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 142  VCARVHGPENDACKPQDAKQSEQLVPVAPAGLXALCDA-VPSCTQTSLTLCRS 297
            +C+ V+GPE   CK +D    E   P+   G   +C   +  C   SL  C S
Sbjct: 2582 ICSEVNGPEKYTCKCRDGYTDESPDPLRRPG--RICKGLINECLDRSLNDCHS 2632


>Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical
           protein Y69H2.3d protein.
          Length = 432

 Score = 30.3 bits (65), Expect = 0.30
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 166 ENDACKPQDAKQSEQLVPVAPAGLXALCDAVPSCTQTSLTLCR 294
           E D C+ Q+   +E+ V V    + A C+ +P+C    L L +
Sbjct: 232 EEDYCRAQNCPYNEECVLVQVTCIRAPCNPIPTCRPKDLRLIK 274


>Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical
           protein Y69H2.3a protein.
          Length = 537

 Score = 30.3 bits (65), Expect = 0.30
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 166 ENDACKPQDAKQSEQLVPVAPAGLXALCDAVPSCTQTSLTLCR 294
           E D C+ Q+   +E+ V V    + A C+ +P+C    L L +
Sbjct: 337 EEDYCRAQNCPYNEECVLVQVTCIRAPCNPIPTCRPKDLRLIK 379


>AF031841-1|AAC13677.1|  601|Caenorhabditis elegans GLY7 protein.
          Length = 601

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 310 LSLVVTCRGLGWSGYSWEQHHIMLXSQPELLVLVVQI 200
           +S+VV     GW+      H ++L S PEL+  VV +
Sbjct: 158 VSVVVVFHNEGWTPLLRTVHSVLLRSPPELIEQVVMV 194


>AC006774-7|AAF60620.1|  601|Caenorhabditis elegans Glycosylation
           related protein 7 protein.
          Length = 601

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 310 LSLVVTCRGLGWSGYSWEQHHIMLXSQPELLVLVVQI 200
           +S+VV     GW+      H ++L S PEL+  VV +
Sbjct: 158 VSVVVVFHNEGWTPLLRTVHSVLLRSPPELIEQVVMV 194


>U53150-1|AAA96123.2|  302|Caenorhabditis elegans Serpentine
           receptor, class sx protein32 protein.
          Length = 302

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 202 SEQLVPVAPAGLXALCDAVPSCTQTSLTL 288
           +E  +P+AP  +  LC ++ SCT  S+ +
Sbjct: 3   AEVNLPIAPIAIFYLCCSIVSCTGNSIMI 31


>U00046-10|AAC47049.3|  958|Caenorhabditis elegans Hypothetical
           protein R13F6.10 protein.
          Length = 958

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -1

Query: 292 CRGLGWSGYSWEQHHIMLXSQPELLVLVVQIVWHLEVCKRHFP 164
           CR LG  G    ++     ++ +L + V++   HLE C R +P
Sbjct: 682 CRALGAVGRVTHENMEPRLARLQLKMTVMEFKQHLEYCCREYP 724


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -1

Query: 148 RRRNE*QGTVARHPRRMRSPWA 83
           RRR    G+ +R PRR RSP A
Sbjct: 465 RRRRSPSGSKSRSPRRRRSPAA 486


>AL132948-12|CAD31814.1|  283|Caenorhabditis elegans Hypothetical
           protein Y39B6A.16 protein.
          Length = 283

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 179 QASFSGPXTRAQTQRMTGHCCKAPPTN-EEPLGHSDRT 69
           +A    P ++AQT + T +    PP + E P+ H  +T
Sbjct: 212 EAPAKSPGSKAQTTKCTSNYQSHPPASFETPIHHPPKT 249


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,839,576
Number of Sequences: 27780
Number of extensions: 121295
Number of successful extensions: 372
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)