Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0294
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   3.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   3.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 128 LKLLILYFVYFVGSMFSCKFS*KNLRFISVLLGNCSLYF 244
           L L+ +Y+ Y++  +F C F    +  + +L   C  YF
Sbjct: 253 LLLVCIYYFYYMHLLFCCAFIIFTMHLLFLL---CIYYF 288


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +3

Query: 486 SNFKIGNNIXTNKMFSYLNGVSLIEVQLKTSN 581
           S F       T    S LN   LIE  + TSN
Sbjct: 4   SKFSPSTTTTTTTTSSALNSTPLIEFNISTSN 35


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +3

Query: 486 SNFKIGNNIXTNKMFSYLNGVSLIEVQLKTSN 581
           S F       T    S LN   LIE  + TSN
Sbjct: 4   SKFSPSTTTTTTTTSSALNSTPLIEFNISTSN 35


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 185 FS*KNLRFISVLLGNCSLYFVEPY 256
           FS +++RF+  +   C L+ + PY
Sbjct: 3   FSRRDIRFLRPIFAVCRLFALVPY 26


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 647 LFYYMHMNIXTGY 685
           LFYYMH  I   Y
Sbjct: 231 LFYYMHQQIIARY 243


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 673 YIHMHVVKKRLFQYYK 626
           +I MH+V  +L  +YK
Sbjct: 60  HIFMHIVPTKLISFYK 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,730
Number of Sequences: 336
Number of extensions: 4287
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)