Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0292
         (714 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0176 - 7477344-7477625                                           29   3.7  
03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-13...    28   8.5  

>02_02_0176 - 7477344-7477625
          Length = 93

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 702 PESLEIKNYXLLWTKKYLIXFPXIF 628
           P    +K Y L  T KYLI FP IF
Sbjct: 49  PSKSRVKCYGLCLTPKYLIVFPFIF 73


>03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-132773,
            132883-132996,133065-133193,133293-133469,133555-133746,
            134844-134981,135327-135559,135900-136003,136633-136727,
            136817-137053,137801-137922,138252-138354,138750-138826,
            138909-139017,139107-139253,139953-140000,140292-140492,
            140589-140738,140917-141002,141088-141193,141278-141373,
            141759-141911,142647-142819,142923-142986,144056-144193,
            144548-144595,144690-144836,144907-144968,146540-146645,
            147357-147461,147548-147679,147765-147974,148070-148171,
            148261-148398
          Length = 1729

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 537  YHWLFFNSMIKKALVHPKFYFM*TDSFIE-NAHFENNSFLK 418
            Y W   + ++K+A + PKF+ +    F++ N+ F N   LK
Sbjct: 879  YPWFAQSMVMKRASIEPKFHDLYLKFFVKVNSRFLNKEVLK 919


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,482,625
Number of Sequences: 37544
Number of extensions: 307693
Number of successful extensions: 567
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)