Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0292
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93383-7|CAB07621.1|  285|Caenorhabditis elegans Hypothetical pr...    29   4.4  
L08403-5|AAT92077.1|  531|Caenorhabditis elegans Hypothetical pr...    28   7.6  
L08403-4|AAA28021.1|  529|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z93383-7|CAB07621.1|  285|Caenorhabditis elegans Hypothetical
           protein F54B8.8 protein.
          Length = 285

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 356 FHFFRDFFCKLTIHFKSEYLISFIKNVLEKLFY 258
           F+     FCK  I FK+E  + + +  ++ LFY
Sbjct: 24  FYLLYSIFCKKNIPFKTELALVYCRFAVDTLFY 56


>L08403-5|AAT92077.1|  531|Caenorhabditis elegans Hypothetical
           protein F42H10.7b protein.
          Length = 531

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 192 EWLPSPMDFSNAKG*GKPLARQIKK 266
           +W+ SPM F+N +G  + L R+ KK
Sbjct: 138 DWMQSPMPFANEEGDNEALNRKRKK 162


>L08403-4|AAA28021.1|  529|Caenorhabditis elegans Hypothetical
           protein F42H10.7a protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 192 EWLPSPMDFSNAKG*GKPLARQIKK 266
           +W+ SPM F+N +G  + L R+ KK
Sbjct: 138 DWMQSPMPFANEEGDNEALNRKRKK 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,794,202
Number of Sequences: 27780
Number of extensions: 292506
Number of successful extensions: 518
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)