Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0289
(658 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 56 3e-10
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 25 0.55
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 24 1.3
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 3.9
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 22 3.9
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 22 3.9
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 22 5.1
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 22 5.1
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 22 5.1
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 21 6.7
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 55.6 bits (128), Expect = 3e-10
Identities = 26/71 (36%), Positives = 50/71 (70%)
Frame = +3
Query: 297 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 476
+ +FE L+P+LL+ V G+ P+ IQ+ A+P +L+ +++++ +Q+G+GKTAAF+L
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSG--RDLMSCAQTGSGKTAAFML 214
Query: 477 AMLSRVDSNKN 509
++ + S+KN
Sbjct: 215 PIIHNLLSDKN 225
Score = 25.8 bits (54), Expect = 0.31
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 512 PQVLCLSPTYELAIQTGEVAAKMA 583
P V+ +SPT ELAIQ + K A
Sbjct: 236 PVVVIMSPTRELAIQIADQGKKFA 259
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 25.0 bits (52), Expect = 0.55
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 131 SPATLFEISNSSAFCPHWL 75
SPA+L IS S F P WL
Sbjct: 197 SPASLPSISPSGGFLPKWL 215
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 61 VINMASQWGQKAEELEISNKVAGLGLDKKHNQETDSDDVP 180
V+N++ G A LE + ++ D +Q+ D D+P
Sbjct: 213 VLNLSKSGGGSAGSLEDDDNISDPEDDDDKDQDMDEGDLP 252
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.2 bits (45), Expect = 3.9
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 417 PQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNILKYCV 527
P NM + + G+ A + S V+SN+N+ + C+
Sbjct: 716 PDNM--KLEKVPGECCAICVNATSLVESNRNVPQKCI 750
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 22.2 bits (45), Expect = 3.9
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 98 KSWRFQIKLQGWAWIKNIIKKQILMMYLIPLMQPILL 208
+S++ K WA K ++ + IL ++ PL+ + L
Sbjct: 383 ESFKSPYKASCWAQFKAVLWRSILAVFKEPLLIKVRL 419
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 22.2 bits (45), Expect = 3.9
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 98 KSWRFQIKLQGWAWIKNIIKKQILMMYLIPLMQPILL 208
+S++ K WA K ++ + IL ++ PL+ + L
Sbjct: 383 ESFKSPYKASCWAQFKAVLWRSILAVFKEPLLIKVRL 419
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 327 PNLLKGVYAMGFNAPSKIQ 383
P+++KG +GF+ P IQ
Sbjct: 321 PHIVKGNQWLGFDDPKSIQ 339
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 327 PNLLKGVYAMGFNAPSKIQ 383
P+++KG +GF+ P IQ
Sbjct: 322 PHIVKGNQWLGFDDPKSIQ 340
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 327 PNLLKGVYAMGFNAPSKIQ 383
P+++KG +GF+ P IQ
Sbjct: 322 PHIVKGNQWLGFDDPKSIQ 340
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 514 RIFLLESTLLNIAKTKAAVFPVPDCDWAII 425
R+ LL TL+ +AK+ VF W ++
Sbjct: 80 RMVLLHKTLVRVAKSLNQVFAPQLLLWVLL 109
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,485
Number of Sequences: 336
Number of extensions: 2914
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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