Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0287
         (692 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha...    31   0.16 
SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr 1|||M...    26   4.5  
SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces pom...    26   4.5  
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po...    26   4.5  
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|...    25   7.9  
SPBPB2B2.08 |||conserved fungal protein|Schizosaccharomyces pomb...    25   7.9  

>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
           Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 697

 Score = 31.1 bits (67), Expect = 0.16
 Identities = 17/94 (18%), Positives = 41/94 (43%)
 Frame = +2

Query: 278 TRVLTAIVEMLNWFAGKQIRNVAAIGGNVMTGSPISDLNPILMSLKVKLNLLSQENGHRT 457
           ++ +      L+    K  + V  +    +    + DL   L  +   ++++ +E GH  
Sbjct: 429 SQAIEEFTNSLSQLPAKHTKRVPLLSNRSLCYQKVGDLKTCLQDVDELVDIIGEEKGHGE 488

Query: 458 VLMDETFFTGYRKNVVKQMKYYFQ*RYRFQPNFN 559
            + D++    Y KN+V++ +   Q   ++Q + N
Sbjct: 489 SIRDKSMNDYYVKNMVRKAQVLEQ-LEKYQESLN 521


>SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 757

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 266 PPYKTRVLTAIVEMLNWFAGKQIRNVAAIGGNV 364
           P Y+ ++L A+V+ LN       +NV +  G+V
Sbjct: 486 PNYRDKILAAVVKRLNRLYNLYKKNVPSFNGHV 518


>SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 177

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 369 VITFPPMAATFLICFPANQFNISTIAVK 286
           +IT    AATF+ CFP    NI     K
Sbjct: 102 LITSLSTAATFMFCFPKTSKNIGAFVEK 129


>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 937

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +3

Query: 123 RCVYPIIIMPNC---VPEL--NTITENEHGLTVGASVTLNDIEKTF 245
           RC+     + +C   VPEL   +I+E      V A V  NDI+KTF
Sbjct: 2   RCIVSYKSLRSCLVNVPELLLESISEPVQNYAVQAVVCKNDIKKTF 47


>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 743

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 383 SDLNPILMSLKVKLNLLSQENGHRTVLMDE 472
           S LNP L +   +L LL Q+N  R +L+ +
Sbjct: 445 SRLNPALKNYMEELKLLEQQNKKRLLLVSQ 474


>SPBPB2B2.08 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 220

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 595 DDIFHSNFSC*WWNSKRT 648
           DD+F  N +  WW SK +
Sbjct: 157 DDVFGQNLATCWWTSKES 174


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,781,580
Number of Sequences: 5004
Number of extensions: 55140
Number of successful extensions: 135
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)