Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0286
(748 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 40 0.001
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 39 0.003
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 38 0.009
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 36 0.029
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 36 0.029
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 36 0.038
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 35 0.050
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 35 0.066
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 35 0.066
At4g02200.2 68417.m00295 drought-responsive family protein simil... 34 0.087
At4g02200.1 68417.m00294 drought-responsive family protein simil... 34 0.087
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 33 0.20
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 33 0.27
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 32 0.35
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 32 0.46
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 32 0.46
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 32 0.46
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 31 0.61
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 31 0.61
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 31 0.61
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 31 0.61
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 31 0.61
At2g15910.1 68415.m01823 CSL zinc finger domain-containing prote... 31 0.61
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 31 0.81
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 31 0.81
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 31 0.81
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 31 1.1
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 31 1.1
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 31 1.1
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 30 1.9
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 30 1.9
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 29 2.5
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 29 2.5
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 29 2.5
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 29 3.3
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 29 3.3
At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ... 29 3.3
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 29 3.3
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 29 3.3
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 29 3.3
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 29 3.3
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 29 4.3
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 29 4.3
At5g16470.1 68418.m01925 zinc finger (C2H2 type) family protein ... 29 4.3
At4g18060.1 68417.m02687 SH3 domain-containing protein 3 (SH3P3)... 29 4.3
At4g14780.1 68417.m02273 protein kinase, putative similar to pro... 29 4.3
At4g39140.4 68417.m05544 expressed protein 28 7.6
At4g39140.3 68417.m05543 expressed protein 28 7.6
At4g39140.2 68417.m05542 expressed protein 28 7.6
At4g39140.1 68417.m05541 expressed protein 28 7.6
At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein ... 28 7.6
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 28 7.6
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 28 7.6
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 28 7.6
At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99... 28 7.6
At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99... 28 7.6
At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99... 28 7.6
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 27 10.0
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 27 10.0
At4g38190.1 68417.m05391 cellulose synthase family protein simil... 27 10.0
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +2
Query: 260 YPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKP 439
Y C +C K +P+ +A+ H KT+H+ PV S V + +G +
Sbjct: 94 YKCSVCGKSFPSYQALGGH-------KTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSG 146
Query: 440 RNHACGMCRKRFTDKKALTQHE 505
+ H C +C K F +AL H+
Sbjct: 147 KTHNCSICFKSFPSGQALGGHK 168
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +2
Query: 239 RHRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVH 418
+ RA+ K C C++ + ++ + H +H KC VC K +++ + +V HV++VH
Sbjct: 5 KKRATEKVWCYYCDREFDDEKILVQHQKAKHF-----KCHVCHKKLSTASGMVIHVLQVH 59
Query: 419 GEKKEKPRN 445
E K N
Sbjct: 60 KENVTKVPN 68
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 3 DHCKKTFVNKSTLVTHLKLH-DGPLPRDECPICHKMVRSTQLKYHVQRHKSKSRYEC--E 173
D C KTF + S L H +H + D+ K + S++LK H H + Y C E
Sbjct: 84 DGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYE 143
Query: 174 ECNKVFSHLATYQAHLK 224
C K FS ++H+K
Sbjct: 144 GCGKAFSLDFNLRSHMK 160
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 96 CHKMVRSTQLKYHVQR-HKSKSRYECEECNKVFSHLATYQAHLK 224
CH + +K H +R H + ++ CE C+K ++ + Y+AHLK
Sbjct: 122 CHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLK 165
Score = 27.5 bits (58), Expect = 10.0
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Frame = +2
Query: 239 RHRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKH----- 403
+H ++ C C+KGY + + H + G H C C + + + ++H
Sbjct: 138 KHSNHKQWVCERCSKGYAVQSDYKAHL--KTCGTRGHSCD-CGRVFSRVESFIEHQDNCS 194
Query: 404 VMRVHGEKKEKPR 442
RVH E P+
Sbjct: 195 ARRVHREPPRPPQ 207
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +3
Query: 6 HCKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQLKYHVQRHKSKSRYECEECNK 185
+C KTF + L H+++H K + Q K Q+HK + + C EC +
Sbjct: 13 YCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVD-QRKMMAQKHKQQQQVGCRECGR 71
Query: 186 VFSHLATYQAHL 221
VF L + H+
Sbjct: 72 VFVSLKALRGHM 83
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 96 CHKMVRSTQLKYHVQR-HKSKSRYECEECNKVFSHLATYQAHLK 224
CH + +K H +R H + ++ CE C+K ++ + Y+AHLK
Sbjct: 125 CHALGDLVGIKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLK 168
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 35.1 bits (77), Expect = 0.050
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 96 CHKMVRSTQLKYHVQR-HKSKSRYECEECNKVFSHLATYQAHLKY--ARAHATE 248
CH + +K H +R H ++ CE C+K ++ + Y+AHLK +R H+ +
Sbjct: 95 CHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKTCGSRGHSCD 148
Score = 27.5 bits (58), Expect = 10.0
Identities = 15/70 (21%), Positives = 30/70 (42%)
Frame = +2
Query: 239 RHRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVH 418
+H ++ C C+KGY + + H + G H C C + + + ++H
Sbjct: 111 KHSVHKQWVCERCSKGYAVQSDYKAHL--KTCGSRGHSCD-CGRVFSRVESFIEH-QDTC 166
Query: 419 GEKKEKPRNH 448
++ +P NH
Sbjct: 167 TIRQPQPTNH 176
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 34.7 bits (76), Expect = 0.066
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = +3
Query: 9 CKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQLKYHVQRHKSKS-----RYECE 173
C K F N+ L +H++ + C IC +K H++ H S + E E
Sbjct: 254 CMKYFTNEECLKSHIRSCHQHI---NCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVE 310
Query: 174 ECNKVFSHLATYQAHLK 224
C+ FS + Q H+K
Sbjct: 311 GCSSTFSKASNLQKHMK 327
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 34.7 bits (76), Expect = 0.066
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = +3
Query: 9 CKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQLKYHVQRHKSKS-----RYECE 173
C K F N+ L +H++ + C IC +K H++ H S + E E
Sbjct: 166 CMKYFTNEECLKSHIRSCHQHI---NCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVE 222
Query: 174 ECNKVFSHLATYQAHLK 224
C+ FS + Q H+K
Sbjct: 223 GCSSTFSKASNLQKHMK 239
>At4g02200.2 68417.m00295 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 207
Score = 34.3 bits (75), Expect = 0.087
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 251 SLKYPCPMCNKGYPTKEAMQDHFNYQH-LGKTAHKCPVCEKPIASRANVVKHVMRVH 418
++ YPCP C+ Y E + H + +H L CPVC + + + ++V H+ H
Sbjct: 40 AVDYPCPFCSDDYDLVE-LCHHIDEEHQLDANNGICPVCSRRV--KMHMVDHITTQH 93
>At4g02200.1 68417.m00294 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 214
Score = 34.3 bits (75), Expect = 0.087
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 251 SLKYPCPMCNKGYPTKEAMQDHFNYQH-LGKTAHKCPVCEKPIASRANVVKHVMRVH 418
++ YPCP C+ Y E + H + +H L CPVC + + + ++V H+ H
Sbjct: 40 AVDYPCPFCSDDYDLVE-LCHHIDEEHQLDANNGICPVCSRRV--KMHMVDHITTQH 93
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 33.1 bits (72), Expect = 0.20
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Frame = +2
Query: 248 ASLKYPCPMCNKGYPTKEAMQDHFNYQHLG-------------KTAHKCPV--CEKPIAS 382
A+ ++ C +CNKG+ + +Q H +L K + CP+ C AS
Sbjct: 78 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDAS 137
Query: 383 RA-----NVVKHVMRVHGEKKEKPRNHACGMCRKRF 475
RA + KH R HGEKK K C C K++
Sbjct: 138 RALGDLTGIKKHYSRKHGEKKWK-----CEKCSKKY 168
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + +++CE+C+K ++ + ++AH K
Sbjct: 144 TGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAK 179
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 32.7 bits (71), Expect = 0.27
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Frame = +2
Query: 248 ASLKYPCPMCNKGYPTKEAMQDHFNYQHL------------GKTAHKCPV--CEKPIASR 385
A+ ++ C +CNKG+ + +Q H +L K + CPV C SR
Sbjct: 57 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSR 116
Query: 386 A-----NVVKHVMRVHGEKKEKPRNHACGMCRKRF 475
A + KH R HGEKK K C C K++
Sbjct: 117 ALGDLTGIKKHFCRKHGEKKWK-----CEKCSKKY 146
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + +++CE+C+K ++ + ++AH K
Sbjct: 122 TGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSK 157
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 32.3 bits (70), Expect = 0.35
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + +++C++C+K ++ ++ ++AH K
Sbjct: 130 TGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSK 165
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 20/93 (21%)
Frame = +2
Query: 257 KYPCPMCNKGYPTKEAMQDH-------------FNYQHLGKTAHKCP--VCEKPIASRA- 388
++ C +CNKG+ + +Q H N + + K + CP C +RA
Sbjct: 67 RFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVHHDPARAL 126
Query: 389 ----NVVKHVMRVHGEKKEKPRNHACGMCRKRF 475
+ KH R HGEKK K C C K++
Sbjct: 127 GDLTGIKKHFSRKHGEKKWK-----CDKCSKKY 154
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 31.9 bits (69), Expect = 0.46
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + +++C++C+K ++ ++ ++AH K
Sbjct: 68 TGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNK 103
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 20/96 (20%)
Frame = +2
Query: 248 ASLKYPCPMCNKGYPTKEAMQDH-------------FNYQHLGKTAHKCPV--CEKPIAS 382
A+ ++ C +CNKG+ ++ +Q H N + K + CP C +
Sbjct: 2 ATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKVYICPEKSCVHHDPA 61
Query: 383 RA-----NVVKHVMRVHGEKKEKPRNHACGMCRKRF 475
RA + KH R HGEKK K C C K++
Sbjct: 62 RALGDLTGIKKHFSRKHGEKKWK-----CDKCSKKY 92
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 31.9 bits (69), Expect = 0.46
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 20/105 (19%)
Frame = +2
Query: 248 ASLKYPCPMCNKGYPTKEAMQDH-------------FNYQHLGKTAHKCP--VCEKPIAS 382
A+ ++ C +CNKG+ + +Q H N + + K + CP C S
Sbjct: 95 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKKVYVCPEASCVHHDPS 154
Query: 383 RA-----NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQH 502
RA + KH R HGEKK K C C K++ + H
Sbjct: 155 RALGDLTGIKKHFCRKHGEKKWK-----CDKCSKKYAVQSDCKAH 194
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + +++C++C+K ++ + +AH K
Sbjct: 161 TGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSK 196
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 105 MVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAH 218
MV+ L H + H S +++EC+ CNK FS H
Sbjct: 29 MVKQIGLNQHTESHTS-NQFECKTCNKRFSSFQALGGH 65
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 31.5 bits (68), Expect = 0.61
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + +++CE+C+K ++ + ++AH K
Sbjct: 144 TGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTK 179
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 31.5 bits (68), Expect = 0.61
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Frame = +2
Query: 251 SLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKC-PVCEKPIASRANVVKHVMRVHGEK 427
+L Y C +C K +P+ +A+ H K +H+ P + + + V GEK
Sbjct: 103 NLPYKCNVCEKAFPSYQALGGH-------KASHRIKPPTVISTTADDSTAPTISIVAGEK 155
Query: 428 ---KEKPRNHACGMCRKRFTDKKALTQHE 505
+ H C +C K F +AL H+
Sbjct: 156 HPIAASGKIHECSICHKVFPTGQALGGHK 184
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 347 HKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQH 502
H+C C K R ++V+H M++ +PR CG+C K +++ +H
Sbjct: 17 HRCVACYKMFNRREHLVEH-MKISYHSLHQPR---CGVCLKHCKSFESVREH 64
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 9 CKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQ-LKYHVQRHKSKSRYECE 173
C K F + LV H+K+ L + C +C K +S + ++ H+ S+ C+
Sbjct: 22 CYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 347 HKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQH 502
H+C C K R ++V+H M++ +PR CG+C K +++ +H
Sbjct: 17 HRCVACYKMFNRREHLVEH-MKISYHSLHQPR---CGVCLKHCKSFESVREH 64
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 9 CKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQ-LKYHVQRHKSKSRYECE 173
C K F + LV H+K+ L + C +C K +S + ++ H+ S+ C+
Sbjct: 22 CYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = +2
Query: 353 CPVCEKPIASRANVVKHVMRVHGEKKEKPRNH------ACGMCRKRFTDKKALTQH 502
CP C +S ++V+HV + H ++ K +NH C C + F D L H
Sbjct: 215 CPQCGAKFSSVTSLVEHVEKTH--ERNKKQNHGNVTVDVCPRCSRGFRDPVDLVNH 268
>At2g15910.1 68415.m01823 CSL zinc finger domain-containing protein
contains Pfam PF05207: CSL zinc finger domain
Length = 367
Score = 31.5 bits (68), Expect = 0.61
Identities = 23/85 (27%), Positives = 34/85 (40%)
Frame = +2
Query: 260 YPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKP 439
YPCP + TKE ++ LG+ CP C I N+ + K
Sbjct: 22 YPCPCGDLFQITKEDLR-------LGEEIANCPSCSLYITVIYNMEDFQNDTKKNNEPKT 74
Query: 440 RNHACGMCRKRFTDKKALTQHEVST 514
R+ +FTDKK + H+ +T
Sbjct: 75 RHPVARRKYLQFTDKKTICNHDENT 99
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 31.1 bits (67), Expect = 0.81
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 13/94 (13%)
Frame = +2
Query: 260 YPCPMCNKGYPTKEAMQDH---FNYQHLGKTAHKCPVCEKPIASRANVVK---------- 400
Y C C+K + + +A+ H LG + KC + AS V+
Sbjct: 118 YQCKTCDKSFHSFQALGGHRASHKKPKLGASVFKCVEKKTASASTVETVEAGAVGSFLSL 177
Query: 401 HVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQH 502
V G KK + + H C +C+ F+ +AL H
Sbjct: 178 QVTSSDGSKKPE-KTHECSICKAEFSSGQALGGH 210
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 31.1 bits (67), Expect = 0.81
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + +++CE+C+K ++ + ++AH K
Sbjct: 144 TGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSK 179
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 31.1 bits (67), Expect = 0.81
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + +++CE+C+K ++ + ++AH K
Sbjct: 154 TGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAK 189
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 135 VQRHKSKSRYECEECNKVFSHLATYQAHLKYARAHATEQV 254
+ R +K RY+CE C KVF +YQA + +H +V
Sbjct: 164 INRATTKGRYKCETCGKVFK---SYQALGGHRASHKKNRV 200
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = +2
Query: 242 HRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHG 421
HRAS K NK E D N + K H+CP+C + AS + H R HG
Sbjct: 191 HRASHKKNRVSNNKTEQRSETEYD--NVVVVAKRIHECPICLRVFASGQALGGH-KRSHG 247
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 19/95 (20%)
Frame = +2
Query: 248 ASLKYPCPMCNKGYPTKEAMQDHFNYQHL------------GKTAHKCP--VCEKPIASR 385
A+ ++ C +CNKG+ + +Q H +L K + CP C SR
Sbjct: 59 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSR 118
Query: 386 A-----NVVKHVMRVHGEKKEKPRNHACGMCRKRF 475
A + KH R HGEKK K C C K++
Sbjct: 119 ALGDLTGIKKHFCRKHGEKKWK-----CDKCSKKY 148
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + +++C++C+K ++ + ++AH K
Sbjct: 124 TGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSK 159
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 19/95 (20%)
Frame = +2
Query: 248 ASLKYPCPMCNKGYPTKEAMQDHFNYQHL---------GKTAHKCPVCEKP--------- 373
A+ ++ C +CNKG+ ++ +Q H +L + K +C +P
Sbjct: 78 ATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSCVHHDPAR 137
Query: 374 -IASRANVVKHVMRVHGEKKEKPRNHACGMCRKRF 475
+ + KH R HGEKK K C C KR+
Sbjct: 138 ALGDLTGIKKHYYRKHGEKKWK-----CDKCSKRY 167
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + +++C++C+K ++ + ++AH K
Sbjct: 143 TGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSK 178
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +3
Query: 51 LKLHDGPLPRD--ECPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
L L D +D ECPIC + T H+Q K + C C VF+ AHL+
Sbjct: 1705 LSLKDWAKGKDVKECPICKSTIEKTDGCNHLQCRCGK--HICWTCLDVFTQAEPCYAHLR 1762
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + +++C++C+K ++ + ++AH K
Sbjct: 142 TGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSK 177
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/75 (29%), Positives = 30/75 (40%)
Frame = +2
Query: 47 PSQVARRSVTAGRVPDMPQDGEVHATEVPRPEAQEQEPVRVRGVQQGVLPPRDLPGAPQV 226
PS R++ A R P MP T P+ + V G ++ V PP L +V
Sbjct: 324 PSVENGRTLGAPRTPPMPASEVQGTTCKPQVKEVRINGFAVSGEKRKVCPPSPLAATMKV 383
Query: 227 RQGARHRASLKYPCP 271
+ AS K P P
Sbjct: 384 KVKENGEASAKPPHP 398
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 9 CKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRS-TQLKYHVQRHKSKSRYECEECNK 185
C + F K LV H+++ + C IC+K RS L+ H+ K +EC
Sbjct: 11 CYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPK-----QECKN 65
Query: 186 VFS 194
+FS
Sbjct: 66 IFS 68
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 332 LGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVS 511
L K H C +C K AN+ H MR HG+ + K R + +L +H S
Sbjct: 212 LAKYTHYCQICGKGFKRDANLRMH-MRAHGD-EYKTREALISPTSQDKKGGYSLKKHYYS 269
Query: 512 TPGRG 526
P G
Sbjct: 270 CPQHG 274
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Frame = +2
Query: 194 PPRDLPGAPQVRQGARHRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKP 373
PP LP P + HR Y C +C K + + +A+ H H T +
Sbjct: 80 PP--LPPLPSRASPSDHR---DYKCTVCGKSFSSYQALGGH-KTSHRKPTNTSITSGNQE 133
Query: 374 IASRAN------VVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHE 505
+++ ++ V+ + + + H C +C K F +AL H+
Sbjct: 134 LSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICFKSFASGQALGGHK 183
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/80 (26%), Positives = 30/80 (37%)
Frame = +3
Query: 9 CKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQLKYHVQRHKSKSRYECEECNKV 188
C K+F L H ++H P+ V + K + S S YEC+ C K+
Sbjct: 48 CGKSFECYQALGGHQRIHR-PIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKI 106
Query: 189 FSHLATYQAHLKYARAHATE 248
F H K R+ E
Sbjct: 107 FGCYRGLGGHTKLHRSTKRE 126
>At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 395
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 248 ASLKYPCPMCNKGYPTKEAMQDH 316
A + Y C +CNKGY + +A + H
Sbjct: 64 APMLYSCGICNKGYRSSKAHEQH 86
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Frame = +2
Query: 266 CPMCNKGYPTKEAMQDHFNYQ-HLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKK---E 433
C CNK + + H+ + H K + P + A + EK E
Sbjct: 6 CNSCNKDFEDDAEQKFHYKSEWHRYNLKRK--IAGVPGVTEALFEARQAAIAQEKVKAVE 63
Query: 434 KPRNHACGMCRKRFTDKKALTQH 502
P ++CG+C K + KA QH
Sbjct: 64 APMLYSCGICNKGYRSSKAHEQH 86
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +2
Query: 272 MCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHA 451
+C+ + + D+F QH EK +R + + R GE++ K R+H
Sbjct: 288 ICDDPAYARSIVDDYFA-QHRESEKELFAEAEKERKAREDEEARIAREEGERRRKERDHR 346
Query: 452 CGMCRKRF 475
G R+R+
Sbjct: 347 YGDRRRRY 354
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +2
Query: 272 MCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHA 451
+C+ + + D+F QH EK +R + + R GE++ K R+H
Sbjct: 342 ICDDPAYARSIVDDYFA-QHRESEKELFAEAEKERKAREDEEARIAREEGERRRKERDHR 400
Query: 452 CGMCRKRF 475
G R+R+
Sbjct: 401 YGDRRRRY 408
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + +++CE+C K ++ + ++AH K
Sbjct: 131 TGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSK 166
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +2
Query: 260 YPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKP 439
+ C C K + + +A+ H + +HK + E + K +KK
Sbjct: 160 FECETCEKVFKSYQALGGH-------RASHKKKIAETDQLGSDELKKK------KKKSTS 206
Query: 440 RNHACGMCRKRFTDKKALTQHEVS 511
+H C +C K FT +AL H+ S
Sbjct: 207 SHHECPICAKVFTSGQALGGHKRS 230
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 398 KHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVSTPGRG 526
K V + G + AC +C K+FT KAL H P RG
Sbjct: 114 KMVSGMVGRSERGDLEVACCVCYKKFTSMKALYGHMRFHPDRG 156
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 19/95 (20%)
Frame = +2
Query: 248 ASLKYPCPMCNKGYPTKEAMQDHFNYQHLG------------KTAHKCP--VCEKPIASR 385
A+ ++ C +C KG+ + +Q H +L K + CP C +SR
Sbjct: 62 ATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSR 121
Query: 386 A-----NVVKHVMRVHGEKKEKPRNHACGMCRKRF 475
A + KH R HGEKK C C KR+
Sbjct: 122 ALGDLTGIKKHFCRKHGEKK-----WTCEKCAKRY 151
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 117 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 224
T +K H R + ++ CE+C K ++ + ++AH K
Sbjct: 127 TGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSK 162
>At5g16470.1 68418.m01925 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 104
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/69 (26%), Positives = 26/69 (37%)
Frame = +2
Query: 227 RQGARHRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHV 406
R G KY CP C P + MQ H +H T + + +A+ A K
Sbjct: 36 RTGKEKGGHAKYECPHCKITVPDLKTMQIHHESKHPKLTYEEPRNLHEALAAPAESSKPK 95
Query: 407 MRVHGEKKE 433
+ G K+
Sbjct: 96 PGIRGSLKK 104
>At4g18060.1 68417.m02687 SH3 domain-containing protein 3 (SH3P3)
nearly identical to SH3 domain-containing protein 3
[Arabidopsis thaliana] GI:16974680; contains Pfam
profile PF00018: SH3 domain
Length = 351
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 41 GHPSQVARRSVTAGRVPDMPQDGEVHATEVPRPEAQEQE 157
G P + AR A R M Q+ E HATEV R +A+ +E
Sbjct: 147 GSPLEDARH--LAQRYSRMRQEAETHATEVSRRQARVRE 183
>At4g14780.1 68417.m02273 protein kinase, putative similar to
protein kinase ATMRK1 [Arabidopsis thaliana]
gi|2351097|dbj|BAA22079
Length = 364
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 21 FVNKSTLVTHLKLHD----GPLPRDECPICHKMVRSTQLKYHVQRHKSK 155
FV S T+L + G LP+ C + + + LK H+ RHKSK
Sbjct: 128 FVGASMGTTNLNIRSADSKGSLPQQACCVVVEYLPGGTLKQHLIRHKSK 176
>At4g39140.4 68417.m05544 expressed protein
Length = 429
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 5/120 (4%)
Frame = +2
Query: 44 HPSQVARRSVTAG-RVPDMPQDGEVHA-TEVPRPEAQEQE---PVRVRGVQQGVLPPRDL 208
HP+ + +T R+ DG+++ + R A E+ P R Q G L
Sbjct: 153 HPASSSTLKLTQHPRLSKQVSDGQIYGQNSLSRSSATEERQGTPTRYDSSQSGPSEGWSL 212
Query: 209 PGAPQVRQGARHRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRA 388
++ +R +L Y N + + DH + H C C +P++ ++
Sbjct: 213 QAFSEMMSSSRSNKALSYD-NYDNDCFGLQRDKIDHHGNRMSKHQQHTCGACSRPLSEKS 271
Score = 27.9 bits (59), Expect = 7.6
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +2
Query: 416 HGEKKEKPRNHACGMCRKRFTDKKALTQHEV 508
HG + K + H CG C + ++K + ++
Sbjct: 248 HGNRMSKHQQHTCGACSRPLSEKSLWSSQKI 278
>At4g39140.3 68417.m05543 expressed protein
Length = 429
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 5/120 (4%)
Frame = +2
Query: 44 HPSQVARRSVTAG-RVPDMPQDGEVHA-TEVPRPEAQEQE---PVRVRGVQQGVLPPRDL 208
HP+ + +T R+ DG+++ + R A E+ P R Q G L
Sbjct: 153 HPASSSTLKLTQHPRLSKQVSDGQIYGQNSLSRSSATEERQGTPTRYDSSQSGPSEGWSL 212
Query: 209 PGAPQVRQGARHRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRA 388
++ +R +L Y N + + DH + H C C +P++ ++
Sbjct: 213 QAFSEMMSSSRSNKALSYD-NYDNDCFGLQRDKIDHHGNRMSKHQQHTCGACSRPLSEKS 271
Score = 27.9 bits (59), Expect = 7.6
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +2
Query: 416 HGEKKEKPRNHACGMCRKRFTDKKALTQHEV 508
HG + K + H CG C + ++K + ++
Sbjct: 248 HGNRMSKHQQHTCGACSRPLSEKSLWSSQKI 278
>At4g39140.2 68417.m05542 expressed protein
Length = 429
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 5/120 (4%)
Frame = +2
Query: 44 HPSQVARRSVTAG-RVPDMPQDGEVHA-TEVPRPEAQEQE---PVRVRGVQQGVLPPRDL 208
HP+ + +T R+ DG+++ + R A E+ P R Q G L
Sbjct: 153 HPASSSTLKLTQHPRLSKQVSDGQIYGQNSLSRSSATEERQGTPTRYDSSQSGPSEGWSL 212
Query: 209 PGAPQVRQGARHRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRA 388
++ +R +L Y N + + DH + H C C +P++ ++
Sbjct: 213 QAFSEMMSSSRSNKALSYD-NYDNDCFGLQRDKIDHHGNRMSKHQQHTCGACSRPLSEKS 271
Score = 27.9 bits (59), Expect = 7.6
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +2
Query: 416 HGEKKEKPRNHACGMCRKRFTDKKALTQHEV 508
HG + K + H CG C + ++K + ++
Sbjct: 248 HGNRMSKHQQHTCGACSRPLSEKSLWSSQKI 278
>At4g39140.1 68417.m05541 expressed protein
Length = 429
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 5/120 (4%)
Frame = +2
Query: 44 HPSQVARRSVTAG-RVPDMPQDGEVHA-TEVPRPEAQEQE---PVRVRGVQQGVLPPRDL 208
HP+ + +T R+ DG+++ + R A E+ P R Q G L
Sbjct: 153 HPASSSTLKLTQHPRLSKQVSDGQIYGQNSLSRSSATEERQGTPTRYDSSQSGPSEGWSL 212
Query: 209 PGAPQVRQGARHRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRA 388
++ +R +L Y N + + DH + H C C +P++ ++
Sbjct: 213 QAFSEMMSSSRSNKALSYD-NYDNDCFGLQRDKIDHHGNRMSKHQQHTCGACSRPLSEKS 271
Score = 27.9 bits (59), Expect = 7.6
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +2
Query: 416 HGEKKEKPRNHACGMCRKRFTDKKALTQHEV 508
HG + K + H CG C + ++K + ++
Sbjct: 248 HGNRMSKHQQHTCGACSRPLSEKSLWSSQKI 278
>At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 364
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 502 RGVHSRERPLTCDICQQTFKQKASLYTHKKTVHKVVPNKKVVEFIEAT 645
+G+ P C +C + F L H K +H+ N+K + IE++
Sbjct: 108 KGLVKPPEPYFCGVCDRRFYTNEKLINHFKQIHE-TENQKRMRQIESS 154
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 347 HKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQH 502
+KC C + ++V+H M++ +P CG+C+K ++L +H
Sbjct: 15 NKCAACYRQFNKLEHLVEH-MKISYHSGHEP---TCGVCKKHCRSFESLREH 62
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 147 KSKSRYECEECNKVFSHLATYQA 215
KS+ R++CE C KVF +YQA
Sbjct: 189 KSRGRFKCETCGKVFK---SYQA 208
>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 214
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 437 PRNHACGMCRKRFTDKKALTQH 502
P+N+ C CR+ F +AL H
Sbjct: 46 PKNYTCSFCRREFRSAQALGGH 67
>At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/58 (24%), Positives = 19/58 (32%)
Frame = +2
Query: 212 GAPQVRQGARHRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASR 385
G H S + CP+C H G+ H CP+C I+ R
Sbjct: 372 GVSSTPPSTTHNESQQQFCPVCLVSAKNMAFNCGHQTCAGCGEDLHVCPICRSSISVR 429
>At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 453
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/58 (24%), Positives = 19/58 (32%)
Frame = +2
Query: 212 GAPQVRQGARHRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASR 385
G H S + CP+C H G+ H CP+C I+ R
Sbjct: 392 GVSSTPPSTTHNESQQQFCPVCLVSAKNMAFNCGHQTCAGCGEDLHVCPICRSSISVR 449
>At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/58 (24%), Positives = 19/58 (32%)
Frame = +2
Query: 212 GAPQVRQGARHRASLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASR 385
G H S + CP+C H G+ H CP+C I+ R
Sbjct: 372 GVSSTPPSTTHNESQQQFCPVCLVSAKNMAFNCGHQTCAGCGEDLHVCPICRSSISVR 429
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 27.5 bits (58), Expect = 10.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 431 EKPRNHACGMCRKRFTDKKALTQHEVS 511
EKP ++ CG+C K F+ +AL H+ S
Sbjct: 71 EKP-SYKCGVCYKTFSSYQALGGHKAS 96
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 27.5 bits (58), Expect = 10.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 413 VHGEKKEKPRNHACGMCRKRFTDKKALTQH 502
V+G K K + H CG+C FT +AL H
Sbjct: 219 VYG-KASKNKVHECGICGAEFTSGQALGGH 247
>At4g38190.1 68417.m05391 cellulose synthase family protein similar
to cellulose synthase catalytic subunit gi:2827143 from
[Arabidopsis thaliana], cellulose synthase-5
(gi:9622882) from Zea mays
Length = 1111
Score = 27.5 bits (58), Expect = 10.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 250 KSQVPLPDVQQGLPDEGSDAGPLQLPAPGED 342
K Q + D+ PD S G L LPAPG+D
Sbjct: 161 KEQYKIGDLDDDTPDYSS--GALPLPAPGKD 189
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,488,896
Number of Sequences: 28952
Number of extensions: 310966
Number of successful extensions: 1482
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1466
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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