BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0285
(815 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16801-1|AAA59571.1| 984|Homo sapiens MLR protein. 38 0.057
BC111758-1|AAI11759.1| 867|Homo sapiens NR3C2 protein protein. 38 0.057
AJ315514-1|CAC67405.1| 706|Homo sapiens mineralocorticoid recep... 38 0.057
AB209056-1|BAD92293.1| 853|Homo sapiens nuclear receptor subfam... 38 0.057
U64898-1|AAC39597.1| 1147|Homo sapiens NRD convertase protein. 32 2.2
BC033448-1|AAH33448.1| 460|Homo sapiens chromosome 6 open readi... 32 2.2
BC008775-1|AAH08775.1| 1150|Homo sapiens NRD1 protein protein. 32 2.2
AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA seq... 32 2.2
AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA seq... 32 2.2
BC038103-1|AAH38103.1| 1092|Homo sapiens ubiquitin specific pept... 31 5.0
AY049784-1|AAL15441.1| 948|Homo sapiens nardilysin protein. 31 5.0
AF028832-1|AAC25497.1| 539|Homo sapiens Hsp89-alpha-delta-N pro... 31 5.0
X59131-1|CAA41848.1| 1092|Homo sapiens hypothetical protein prot... 30 8.7
BC036027-1|AAH36027.1| 1092|Homo sapiens ubiquitin specific pept... 30 8.7
AL138681-1|CAH70264.1| 1092|Homo sapiens ubiquitin specific pept... 30 8.7
>M16801-1|AAA59571.1| 984|Homo sapiens MLR protein.
Length = 984
Score = 37.5 bits (83), Expect = 0.057
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 451 PSNIKVESPKFRPNNLYMNIPVSCR---NNQKCSCTHPRKNPNRSTL 582
PS+ V+SP PNN+ + VS NN +CS + P NRSTL
Sbjct: 276 PSHCSVKSPVSSPNNVTLRSSVSSPANINNSRCSVSSPSNTNNRSTL 322
>BC111758-1|AAI11759.1| 867|Homo sapiens NR3C2 protein protein.
Length = 867
Score = 37.5 bits (83), Expect = 0.057
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 451 PSNIKVESPKFRPNNLYMNIPVSCR---NNQKCSCTHPRKNPNRSTL 582
PS+ V+SP PNN+ + VS NN +CS + P NRSTL
Sbjct: 276 PSHCSVKSPVSSPNNVTLRSSVSSPANINNSRCSVSSPSNTNNRSTL 322
>AJ315514-1|CAC67405.1| 706|Homo sapiens mineralocorticoid receptor
delta protein.
Length = 706
Score = 37.5 bits (83), Expect = 0.057
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 451 PSNIKVESPKFRPNNLYMNIPVSCR---NNQKCSCTHPRKNPNRSTL 582
PS+ V+SP PNN+ + VS NN +CS + P NRSTL
Sbjct: 276 PSHCSVKSPVSSPNNVTLRSSVSSPANINNSRCSVSSPSNTNNRSTL 322
>AB209056-1|BAD92293.1| 853|Homo sapiens nuclear receptor subfamily
3, group C, member 2 variant protein.
Length = 853
Score = 37.5 bits (83), Expect = 0.057
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 451 PSNIKVESPKFRPNNLYMNIPVSCR---NNQKCSCTHPRKNPNRSTL 582
PS+ V+SP PNN+ + VS NN +CS + P NRSTL
Sbjct: 145 PSHCSVKSPVSSPNNVTLRSSVSSPANINNSRCSVSSPSNTNNRSTL 191
>U64898-1|AAC39597.1| 1147|Homo sapiens NRD convertase protein.
Length = 1147
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/56 (30%), Positives = 35/56 (62%)
Frame = +2
Query: 8 RTPADLARDFKHYRLADMLSDHMKISEFSNMYYYLKNMSDNEKQDKTEELESKEED 175
++P+D + +++ +L + L + IS+ SNM N +D+E++++ EE E +ED
Sbjct: 105 KSPSD-PKQYRYIKLQNGLQA-LLISDLSNMEGKTGNTTDDEEEEEVEEEEDDDED 158
>BC033448-1|AAH33448.1| 460|Homo sapiens chromosome 6 open reading
frame 182 protein.
Length = 460
Score = 32.3 bits (70), Expect = 2.2
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +1
Query: 310 DESEKQSRASFKLPKVKEQQLYQNELPCHDDTADRIQQAIENDYLFQPSNIKVESPKFRP 489
D+ E + K ++K +Q+ ++L H D+ ++QQ ++N + + S I+ E +
Sbjct: 358 DDIECELECLLKKMEIKGEQI--SKLKKHQDSVCKLQQKVQNSKMSEASGIQQEDSYPKG 415
Query: 490 NNLYMNIPVSCRNN----QKCSCTHP 555
+ N P C + QK S HP
Sbjct: 416 SKNIKNSPRKCLTDTNLFQKNSSFHP 441
>BC008775-1|AAH08775.1| 1150|Homo sapiens NRD1 protein protein.
Length = 1150
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/56 (30%), Positives = 35/56 (62%)
Frame = +2
Query: 8 RTPADLARDFKHYRLADMLSDHMKISEFSNMYYYLKNMSDNEKQDKTEELESKEED 175
++P+D + +++ +L + L + IS+ SNM N +D+E++++ EE E +ED
Sbjct: 105 KSPSD-PKQYRYIKLQNGLQA-LLISDLSNMEGKTGNTTDDEEEEEVEEEEDDDED 158
>AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 436
Score = 32.3 bits (70), Expect = 2.2
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +1
Query: 310 DESEKQSRASFKLPKVKEQQLYQNELPCHDDTADRIQQAIENDYLFQPSNIKVESPKFRP 489
D+ E + K ++K +Q+ ++L H D+ ++QQ ++N + + S I+ E +
Sbjct: 334 DDIECELECLLKKMEIKGEQI--SKLKKHQDSVCKLQQKVQNSKMSEASGIQQEDSYPKG 391
Query: 490 NNLYMNIPVSCRNN----QKCSCTHP 555
+ N P C + QK S HP
Sbjct: 392 SKNIKNSPRKCLTDTNLFQKNSSFHP 417
>AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 360
Score = 32.3 bits (70), Expect = 2.2
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +1
Query: 310 DESEKQSRASFKLPKVKEQQLYQNELPCHDDTADRIQQAIENDYLFQPSNIKVESPKFRP 489
D+ E + K ++K +Q+ ++L H D+ ++QQ ++N + + S I+ E +
Sbjct: 258 DDIECELECLLKKMEIKGEQI--SKLKKHQDSVCKLQQKVQNSKMSEASGIQQEDSYPKG 315
Query: 490 NNLYMNIPVSCRNN----QKCSCTHP 555
+ N P C + QK S HP
Sbjct: 316 SKNIKNSPRKCLTDTNLFQKNSSFHP 341
>BC038103-1|AAH38103.1| 1092|Homo sapiens ubiquitin specific
peptidase like 1 protein.
Length = 1092
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 192 HVILWTRLSAKIQNKMS*CLPGSLQRNVHAKFGRNF**L**IRKAISCVVQTSKSQRTTT 371
H+++W R +++ +K + CLP + HA + SC V + S T +
Sbjct: 493 HIVIWERKISQVTDKEAACLPLKKTNDQHALSNEK------PVSSTSCSVGDAASAETAS 546
Query: 372 V--PKRIAVSRRHSGQD 416
V PK I+V+ R QD
Sbjct: 547 VTHPKDISVAPRTLSQD 563
>AY049784-1|AAL15441.1| 948|Homo sapiens nardilysin protein.
Length = 948
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/56 (30%), Positives = 34/56 (60%)
Frame = +2
Query: 8 RTPADLARDFKHYRLADMLSDHMKISEFSNMYYYLKNMSDNEKQDKTEELESKEED 175
++P+D + +++ +L + L + IS+ SNM N +D+E++ + EE E +ED
Sbjct: 105 KSPSD-PKQYRYIKLQNGLQA-LLISDLSNMEGKTGNTTDDEEEGEVEEEEDDDED 158
>AF028832-1|AAC25497.1| 539|Homo sapiens Hsp89-alpha-delta-N
protein.
Length = 539
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +2
Query: 107 YLKNMSDNEKQDKTEELESKEEDLRIIETCDTVDSPICEDPEQDVIVSPRIPSAKRARKI 286
Y K D+ EE E KEE+ + E ++ D P ED D + K+ +KI
Sbjct: 29 YFKERDKEVSDDEAEEKEDKEEE-KEKEEKESEDKPEIEDVGSDEEEEKKDGDKKKKKKI 87
Query: 287 WKKFL 301
+K++
Sbjct: 88 KEKYI 92
>X59131-1|CAA41848.1| 1092|Homo sapiens hypothetical protein
protein.
Length = 1092
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 192 HVILWTRLSAKIQNKMS*CLPGSLQRNVHAKFGRNF**L**IRKAISCVVQTSKSQRTTT 371
H+++W R +++ +K + CLP + HA SC V + S T +
Sbjct: 493 HIVIWERKISQVTDKEAACLPLKKTNDQHALSNEK------PVSLTSCSVGDAASAETAS 546
Query: 372 V--PKRIAVSRRHSGQD 416
V PK I+V+ R QD
Sbjct: 547 VTHPKDISVAPRTLSQD 563
>BC036027-1|AAH36027.1| 1092|Homo sapiens ubiquitin specific
peptidase like 1 protein.
Length = 1092
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 192 HVILWTRLSAKIQNKMS*CLPGSLQRNVHAKFGRNF**L**IRKAISCVVQTSKSQRTTT 371
H+++W R +++ +K + CLP + HA SC V + S T +
Sbjct: 493 HIVIWERKISQVTDKEAACLPLKKTNDQHALSNEK------PVSLTSCSVGDAASAETAS 546
Query: 372 V--PKRIAVSRRHSGQD 416
V PK I+V+ R QD
Sbjct: 547 VTHPKDISVAPRTLSQD 563
>AL138681-1|CAH70264.1| 1092|Homo sapiens ubiquitin specific
peptidase like 1 protein.
Length = 1092
Score = 30.3 bits (65), Expect = 8.7
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 192 HVILWTRLSAKIQNKMS*CLPGSLQRNVHAKFGRNF**L**IRKAISCVVQTSKSQRTTT 371
H+++W R +++ +K + CLP + HA SC V + S T +
Sbjct: 493 HIVIWERKISQVTDKEAACLPLKKTNDQHALSNEK------PVSLTSCSVGDAASAETAS 546
Query: 372 V--PKRIAVSRRHSGQD 416
V PK I+V+ R QD
Sbjct: 547 VTHPKDISVAPRTLSQD 563
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,126,246
Number of Sequences: 237096
Number of extensions: 2100073
Number of successful extensions: 5753
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5726
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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