BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0285 (815 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 33 0.24 AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 31 1.3 U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 28 7.0 Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 28 7.0 U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 28 7.0 AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical ... 28 7.0 Z78064-4|CAB01507.1| 235|Caenorhabditis elegans Hypothetical pr... 28 9.2 U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 28 9.2 U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 28 9.2 AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 28 9.2 >AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, unconventional myosinprotein 8, isoform a protein. Length = 1219 Score = 33.1 bits (72), Expect = 0.24 Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 6/107 (5%) Frame = +2 Query: 5 HRTPADLARDFKHYRLADMLSDHMKISEFSNMY-YYLKN----MSDNEKQDKTEELESKE 169 H T DL + H +L +DH + +E N Y +Y+K ++D +KQ K++EL E Sbjct: 893 HSTIRDLEKLVSHIKLTTSANDHFEKAE--NAYEHYVKRVDSMIADLKKQQKSDELAEIE 950 Query: 170 EDLRIIETCDTVDSPICEDPEQDVIVSPRIPSAKR-ARKIWKKFLIT 307 R E + ++ ++ E+ + ++ ++ A+K + +LI+ Sbjct: 951 RKRRESEEKERLEIEAKKEAERQREIKRKLEEQQQNAQKEHENYLIS 997 >AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, unconventional myosinprotein 8, isoform b protein. Length = 1144 Score = 30.7 bits (66), Expect = 1.3 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 5/82 (6%) Frame = +2 Query: 5 HRTPADLARDFKHYRLADMLSDHMKISEFSNMY-YYLKN----MSDNEKQDKTEELESKE 169 H T DL + H +L +DH + +E N Y +Y+K ++D +KQ K++EL E Sbjct: 893 HSTIRDLEKLVSHIKLTTSANDHFEKAE--NAYEHYVKRVDSMIADLKKQQKSDELAEIE 950 Query: 170 EDLRIIETCDTVDSPICEDPEQ 235 R E + ++ ++ E+ Sbjct: 951 RKRRESEEKERLEIEAKKEAER 972 >U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical protein C27F2.1 protein. Length = 673 Score = 29.1 bits (62), Expect = 4.0 Identities = 12/60 (20%), Positives = 28/60 (46%) Frame = +1 Query: 223 RSRTRCHSVSPDPFSETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQLYQNELPCHDD 402 + + ++ P+P E + ++ D D+ E+ K PKV+E+ ++++ D Sbjct: 35 KKEKKSKTIKPEPEPEPVNEYEDDFEDYEDDFEEDDEEEKKAPKVEEKPQKESKVEAEVD 94 >Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical protein F02E9.4b protein. Length = 1507 Score = 28.3 bits (60), Expect = 7.0 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +2 Query: 137 QDKTEELESKEEDLRIIET--CDTVDSPICEDPEQDVIVSPRI 259 +DK E E EED +IE CD CED +Q++ +S + Sbjct: 440 EDKNNE-EMMEEDNHLIEEIICDDRKKDDCEDSQQEIEMSSEL 481 >Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical protein F02E9.4a protein. Length = 1505 Score = 28.3 bits (60), Expect = 7.0 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +2 Query: 137 QDKTEELESKEEDLRIIET--CDTVDSPICEDPEQDVIVSPRI 259 +DK E E EED +IE CD CED +Q++ +S + Sbjct: 440 EDKNNE-EMMEEDNHLIEEIICDDRKKDDCEDSQQEIEMSSEL 481 >U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical protein F54D11.2 protein. Length = 1145 Score = 28.3 bits (60), Expect = 7.0 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +2 Query: 188 ETCDTVDSPICED-PEQDVIVSPRIPSAKRARKI 286 ET DT+ + +CED E+ + P++ AK+ KI Sbjct: 350 ETMDTILAKVCEDGVEKHEDIDPKVVKAKKLAKI 383 >AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical protein Y34D9A.1 protein. Length = 413 Score = 28.3 bits (60), Expect = 7.0 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +3 Query: 531 PEVFLYSPTEESKSFNIETPTSDISQINLSTK 626 PE+ + P E KS + S+I QIN+ K Sbjct: 62 PEMHIIEPAEHMKSLKVLMQKSEIEQINIGFK 93 >Z78064-4|CAB01507.1| 235|Caenorhabditis elegans Hypothetical protein F57B1.7 protein. Length = 235 Score = 27.9 bits (59), Expect = 9.2 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +3 Query: 519 MPQQPEVFLYSPTEESKSFNIETPTSDISQINLSTKDIRSS 641 MP P + ++ PT S +TPTS I ST + +S Sbjct: 70 MPFTPSIPMFMPTSADCSPTTQTPTSSIPSSIASTSPLMTS 110 >U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical protein F55F8.3 protein. Length = 910 Score = 27.9 bits (59), Expect = 9.2 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +1 Query: 262 FSETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQL 372 F+E L + SD DE E ++ S KLP K L Sbjct: 646 FTEFGNMQLVDTSDEEDELEPNNKMSIKLPGTKNFDL 682 >U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical protein F33G12.5 protein. Length = 928 Score = 27.9 bits (59), Expect = 9.2 Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 2/51 (3%) Frame = +2 Query: 47 RLADMLSDHMKISE-FSNMYYYLKN-MSDNEKQDKTEELESKEEDLRIIET 193 R+ D+ +++ + E F+N L++ +D +++ ++LESK+E L + ET Sbjct: 633 RVQDLHAENEALREAFNNCRQQLEDERADRRAEEERKDLESKQEQLELKET 683 >AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical protein Y48G1A.4 protein. Length = 813 Score = 27.9 bits (59), Expect = 9.2 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Frame = +2 Query: 113 KNMSDNEKQDKTEELESKEEDL-RIIETCDTVDSPICEDPEQD 238 KN+ +++ D E+LE +EEDL ++E D ++ ++ Q+ Sbjct: 321 KNLDGSDESDDDEDLEDEEEDLDDLLEDEDELEEDSDDEEAQE 363 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,225,437 Number of Sequences: 27780 Number of extensions: 349196 Number of successful extensions: 1495 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1331 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1494 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2008899418 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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