Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0285
         (815 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ...    33   0.24 
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ...    31   1.3  
U40419-8|AAA81428.3|  673|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p...    28   7.0  
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AC024756-2|AAK29884.1|  413|Caenorhabditis elegans Hypothetical ...    28   7.0  
Z78064-4|CAB01507.1|  235|Caenorhabditis elegans Hypothetical pr...    28   9.2  
U80447-3|AAB37807.2|  910|Caenorhabditis elegans Hypothetical pr...    28   9.2  
U41278-4|AAK31513.3|  928|Caenorhabditis elegans Hypothetical pr...    28   9.2  
AC024792-2|AAF60680.2|  813|Caenorhabditis elegans Hypothetical ...    28   9.2  

>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 8, isoform a protein.
          Length = 1219

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
 Frame = +2

Query: 5    HRTPADLARDFKHYRLADMLSDHMKISEFSNMY-YYLKN----MSDNEKQDKTEELESKE 169
            H T  DL +   H +L    +DH + +E  N Y +Y+K     ++D +KQ K++EL   E
Sbjct: 893  HSTIRDLEKLVSHIKLTTSANDHFEKAE--NAYEHYVKRVDSMIADLKKQQKSDELAEIE 950

Query: 170  EDLRIIETCDTVDSPICEDPEQDVIVSPRIPSAKR-ARKIWKKFLIT 307
               R  E  + ++    ++ E+   +  ++   ++ A+K  + +LI+
Sbjct: 951  RKRRESEEKERLEIEAKKEAERQREIKRKLEEQQQNAQKEHENYLIS 997


>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 8, isoform b protein.
          Length = 1144

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
 Frame = +2

Query: 5    HRTPADLARDFKHYRLADMLSDHMKISEFSNMY-YYLKN----MSDNEKQDKTEELESKE 169
            H T  DL +   H +L    +DH + +E  N Y +Y+K     ++D +KQ K++EL   E
Sbjct: 893  HSTIRDLEKLVSHIKLTTSANDHFEKAE--NAYEHYVKRVDSMIADLKKQQKSDELAEIE 950

Query: 170  EDLRIIETCDTVDSPICEDPEQ 235
               R  E  + ++    ++ E+
Sbjct: 951  RKRRESEEKERLEIEAKKEAER 972


>U40419-8|AAA81428.3|  673|Caenorhabditis elegans Hypothetical
           protein C27F2.1 protein.
          Length = 673

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/60 (20%), Positives = 28/60 (46%)
 Frame = +1

Query: 223 RSRTRCHSVSPDPFSETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQLYQNELPCHDD 402
           +   +  ++ P+P  E   +  ++  D  D+ E+      K PKV+E+   ++++    D
Sbjct: 35  KKEKKSKTIKPEPEPEPVNEYEDDFEDYEDDFEEDDEEEKKAPKVEEKPQKESKVEAEVD 94


>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
           protein F02E9.4b protein.
          Length = 1507

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +2

Query: 137 QDKTEELESKEEDLRIIET--CDTVDSPICEDPEQDVIVSPRI 259
           +DK  E E  EED  +IE   CD      CED +Q++ +S  +
Sbjct: 440 EDKNNE-EMMEEDNHLIEEIICDDRKKDDCEDSQQEIEMSSEL 481


>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
           protein F02E9.4a protein.
          Length = 1505

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +2

Query: 137 QDKTEELESKEEDLRIIET--CDTVDSPICEDPEQDVIVSPRI 259
           +DK  E E  EED  +IE   CD      CED +Q++ +S  +
Sbjct: 440 EDKNNE-EMMEEDNHLIEEIICDDRKKDDCEDSQQEIEMSSEL 481


>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
           protein F54D11.2 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 188 ETCDTVDSPICED-PEQDVIVSPRIPSAKRARKI 286
           ET DT+ + +CED  E+   + P++  AK+  KI
Sbjct: 350 ETMDTILAKVCEDGVEKHEDIDPKVVKAKKLAKI 383


>AC024756-2|AAK29884.1|  413|Caenorhabditis elegans Hypothetical
           protein Y34D9A.1 protein.
          Length = 413

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 531 PEVFLYSPTEESKSFNIETPTSDISQINLSTK 626
           PE+ +  P E  KS  +    S+I QIN+  K
Sbjct: 62  PEMHIIEPAEHMKSLKVLMQKSEIEQINIGFK 93


>Z78064-4|CAB01507.1|  235|Caenorhabditis elegans Hypothetical
           protein F57B1.7 protein.
          Length = 235

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 519 MPQQPEVFLYSPTEESKSFNIETPTSDISQINLSTKDIRSS 641
           MP  P + ++ PT    S   +TPTS I     ST  + +S
Sbjct: 70  MPFTPSIPMFMPTSADCSPTTQTPTSSIPSSIASTSPLMTS 110


>U80447-3|AAB37807.2|  910|Caenorhabditis elegans Hypothetical
           protein F55F8.3 protein.
          Length = 910

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 262 FSETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQL 372
           F+E     L + SD  DE E  ++ S KLP  K   L
Sbjct: 646 FTEFGNMQLVDTSDEEDELEPNNKMSIKLPGTKNFDL 682


>U41278-4|AAK31513.3|  928|Caenorhabditis elegans Hypothetical
           protein F33G12.5 protein.
          Length = 928

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
 Frame = +2

Query: 47  RLADMLSDHMKISE-FSNMYYYLKN-MSDNEKQDKTEELESKEEDLRIIET 193
           R+ D+ +++  + E F+N    L++  +D   +++ ++LESK+E L + ET
Sbjct: 633 RVQDLHAENEALREAFNNCRQQLEDERADRRAEEERKDLESKQEQLELKET 683


>AC024792-2|AAF60680.2|  813|Caenorhabditis elegans Hypothetical
           protein Y48G1A.4 protein.
          Length = 813

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +2

Query: 113 KNMSDNEKQDKTEELESKEEDL-RIIETCDTVDSPICEDPEQD 238
           KN+  +++ D  E+LE +EEDL  ++E  D ++    ++  Q+
Sbjct: 321 KNLDGSDESDDDEDLEDEEEDLDDLLEDEDELEEDSDDEEAQE 363


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,225,437
Number of Sequences: 27780
Number of extensions: 349196
Number of successful extensions: 1495
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1494
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)