Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0284
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 cha...    30   2.8  
M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein ( D.me...    30   2.8  
AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB...    30   2.8  
AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA...    30   2.8  
AY122156-1|AAM52668.1|  376|Drosophila melanogaster LD10135p pro...    29   4.9  
AE014134-2274|AAF53239.1|  376|Drosophila melanogaster CG9933-PA...    29   4.9  

>M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 chain
           protein.
          Length = 1788

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 114 RERDRLRADPWLIDRACELSSCYPATG 194
           R+R +   + ++    CE SSCYPATG
Sbjct: 35  RDRPKYPPNKFIKTHPCERSSCYPATG 61


>M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein (
           D.melanogaster lamininB1 subunit mRNA, complete cds. ).
          Length = 1788

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 114 RERDRLRADPWLIDRACELSSCYPATG 194
           R+R +   + ++    CE SSCYPATG
Sbjct: 35  RDRPKYPPNKFIKTHPCERSSCYPATG 61


>AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB,
           isoform B protein.
          Length = 1788

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 114 RERDRLRADPWLIDRACELSSCYPATG 194
           R+R +   + ++    CE SSCYPATG
Sbjct: 33  RDRPKYPPNKFIKTHPCERSSCYPATG 59


>AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA,
           isoform A protein.
          Length = 1788

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 114 RERDRLRADPWLIDRACELSSCYPATG 194
           R+R +   + ++    CE SSCYPATG
Sbjct: 33  RDRPKYPPNKFIKTHPCERSSCYPATG 59


>AY122156-1|AAM52668.1|  376|Drosophila melanogaster LD10135p
           protein.
          Length = 376

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 268 TGSSVSTFTDSHISSPKQTMSIGSVQSMLCKEKPTQVVPPVVNSEVSKVIINQVRSTP 441
           TG+SVS  T +  S+P    S  S   +  ++ P+Q  P   +S  S V + +VR  P
Sbjct: 126 TGASVSASTST--STPTSASSSISGSMLESQQTPSQSTPETTDSASSSVRVKKVRFHP 181


>AE014134-2274|AAF53239.1|  376|Drosophila melanogaster CG9933-PA
           protein.
          Length = 376

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 268 TGSSVSTFTDSHISSPKQTMSIGSVQSMLCKEKPTQVVPPVVNSEVSKVIINQVRSTP 441
           TG+SVS  T +  S+P    S  S   +  ++ P+Q  P   +S  S V + +VR  P
Sbjct: 126 TGASVSASTST--STPTSASSSISGSMLESQQTPSQSTPETTDSASSSVRVKKVRFHP 181


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,761,300
Number of Sequences: 53049
Number of extensions: 543094
Number of successful extensions: 1507
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)