Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0283
         (728 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5FVZ8 Cluster: Diguanylate phosphodiesterase; n=1; Aci...    35   2.3  
UniRef50_UPI00015552AF Cluster: PREDICTED: hypothetical protein,...    33   5.4  
UniRef50_UPI0000D9987C Cluster: PREDICTED: hypothetical protein;...    33   7.2  
UniRef50_UPI0000EB3857 Cluster: UPI0000EB3857 related cluster; n...    33   9.5  

>UniRef50_A5FVZ8 Cluster: Diguanylate phosphodiesterase; n=1;
           Acidiphilium cryptum JF-5|Rep: Diguanylate
           phosphodiesterase - Acidiphilium cryptum (strain JF-5)
          Length = 305

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
 Frame = +3

Query: 159 RTDSSKITKMANRRPQPG----RRTDFGRNDRGKNFHVTMCPRGSPEARGSGYPTFSLWL 326
           RT+S +  + + RR + G    R        R  +F +   PR    + G G+ +  LWL
Sbjct: 32  RTESERRERASLRRLEAGEQRKRAARLAEALRNDSFVLRYLPRLDLASPGDGFVSAELWL 91

Query: 327 EAPPRPRWLLPVTSLI 374
             P R R L+PV  L+
Sbjct: 92  GLPNRRRGLMPVAPLL 107


>UniRef50_UPI00015552AF Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           hypothetical protein, partial - Ornithorhynchus anatinus
          Length = 441

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +3

Query: 204 QPGRRTDFGRNDRGKNFHV----TMCPRGSPEARGSGYPTFSLWLEAPPRPR 347
           +PG R+  GR  +G   H     T  P G+PEARG G  T  L    PPRPR
Sbjct: 149 EPGLRS-LGRATQGPLLHPPPRWTRPPDGNPEARGEGEKTL-LRSPRPPRPR 198


>UniRef50_UPI0000D9987C Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 157

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -1

Query: 350 PAWPRRSLQPEGKGWVTAPPGLRTATGTH 264
           PAW RR  Q EG GW    PG  TA   H
Sbjct: 98  PAWWRRQQQQEGLGWAGRGPGGSTARPLH 126


>UniRef50_UPI0000EB3857 Cluster: UPI0000EB3857 related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB3857 UniRef100
           entry - Canis familiaris
          Length = 420

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +3

Query: 267 CPRG---SPEARGSGYPTFSLWLEAP-PRPRWLLPVTSL 371
           CP G    PE   +  P + L L  P PRPRWLLPV  L
Sbjct: 363 CPSGRQEGPEPDPAPRPPWRLGLLPPIPRPRWLLPVPGL 401


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,204,129
Number of Sequences: 1657284
Number of extensions: 16389074
Number of successful extensions: 42301
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42283
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)