Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0282
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0946 - 29075600-29076229                                         82   3e-16
07_01_0908 + 7653813-7653849,7655220-7655350,7655946-7656020,765...    29   4.3  
11_01_0706 + 5811722-5814025                                           28   5.6  
05_05_0381 + 24531622-24532918,24535334-24535468,24535592-245357...    28   7.5  
03_01_0366 - 2848449-2849032,2849155-2849233,2849346-2849608,284...    27   9.9  

>03_05_0946 - 29075600-29076229
          Length = 209

 Score = 82.2 bits (194), Expect = 3e-16
 Identities = 40/100 (40%), Positives = 56/100 (56%)
 Frame = +3

Query: 306 DLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDC 485
           +LSL K+KS   +      +  + NS+F+GR VAKLPF P+  +Q +SHR +PG+D TDC
Sbjct: 105 ELSLSKLKSGAVVAAVLFVVFGLLNSLFEGRAVAKLPFAPVPLVQRMSHRGVPGNDPTDC 164

Query: 486 SFIFLYILVQ*ASDKTYKSCLVLHLLELASKQGGALFAAP 605
           S +FLY L   +     +  L       A+  GG LF  P
Sbjct: 165 SMVFLYFLCSISIRTNLQKLLGFAPPRAAAAAGGGLFPMP 204



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 24/56 (42%), Positives = 35/56 (62%)
 Frame = +1

Query: 76  WSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDS 243
           + DSL +V IS  TA L E ++W+L+YRT  Y  L+  +ER S+KL+  K    +S
Sbjct: 10  YGDSLSVVAISGATAVLCEAISWLLIYRTATYNSLRATIERHSRKLDAMKAGASNS 65


>07_01_0908 +
           7653813-7653849,7655220-7655350,7655946-7656020,
           7657007-7657111,7657648-7657911,7658474-7658614
          Length = 250

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 172 QKLKVEVERQSKKLEKRKEAHGDSLD 249
           Q++ +E ERQ++++E   E  GD++D
Sbjct: 148 QRIMMEFERQNERMEMTSEVMGDAID 173


>11_01_0706 + 5811722-5814025
          Length = 767

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 457 IYLVMITQIVLSYFCTFLYNEHQTKHTKVAW--FC-TFSSWLQNKVVLYLLHLRHN 615
           I+L++      +   +FL N +   +  ++W  F  T   W+ + V L+ LHL HN
Sbjct: 427 IFLLLSHNSFSAKLPSFLRNSNLLSYVDLSWNKFSGTLPQWIGHMVNLHFLHLSHN 482


>05_05_0381 +
           24531622-24532918,24535334-24535468,24535592-24535764,
           24536029-24536239,24536287-24536554,24536664-24536814,
           24536938-24537246
          Length = 847

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
 Frame = +1

Query: 88  LLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVER-----QSKKLEKRKEAHGDSLD 249
           ++ V +SIC   +   LT + ++RT+K +  +           S++L     +HGD LD
Sbjct: 445 IIAVVVSICALAIILALTGMYIWRTKKTKARRQGPSNWSGGLHSRELHSEGNSHGDDLD 503


>03_01_0366 -
           2848449-2849032,2849155-2849233,2849346-2849608,
           2849742-2849862
          Length = 348

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 145 VLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDS 243
           +L Y TEK  +    V   SKK EK+K+  GD+
Sbjct: 180 MLTYLTEKLNRAVEAVAPGSKKDEKKKDKGGDA 212


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,370,415
Number of Sequences: 37544
Number of extensions: 252281
Number of successful extensions: 622
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)