Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0282
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50044-9|CAA90361.1|  186|Caenorhabditis elegans Hypothetical pr...   123   1e-28
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr...    28   5.0  
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro...    28   5.0  
AL110485-7|CAB60355.1|  237|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z82073-5|CAB63322.1|  333|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z50044-9|CAA90361.1|  186|Caenorhabditis elegans Hypothetical
           protein F22B5.10 protein.
          Length = 186

 Score =  123 bits (297), Expect = 1e-28
 Identities = 62/103 (60%), Positives = 74/103 (71%)
 Frame = +3

Query: 306 DLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDC 485
           D+S+ KMKSMFAIG AFTALLS FNSIF+GRVVAKLPFYPI +IQGLSHRNL G+D TDC
Sbjct: 79  DMSMFKMKSMFAIGLAFTALLSTFNSIFEGRVVAKLPFYPIGFIQGLSHRNLIGEDMTDC 138

Query: 486 SFIFLYILVQ*ASDKTYKSCLVLHLLELASKQGGALFAAPQTQ 614
           SFIFLYIL      +  +  L        ++Q  + +A P +Q
Sbjct: 139 SFIFLYILCTMTVRQNLQKILGFAPSRAMARQQSSPWAPPNSQ 181



 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 29/59 (49%), Positives = 46/59 (77%)
 Frame = +1

Query: 73  MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLD 249
           M  D LLI+ I+  TA  GEG+TW+LVYR++ Y++LK ++++++KKLEK+K+  GD+ D
Sbjct: 1   MLGDCLLIIAIAFGTALAGEGITWLLVYRSDHYKRLKADMDKKTKKLEKKKQEVGDTND 59


>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
           protein C25D7.3 protein.
          Length = 2150

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 151 VYRTEKYQKLKVEVERQSKKLEKR-KEAH 234
           +YRTE ++K+K   ER  +  EKR KE H
Sbjct: 850 IYRTELWEKMKPVYERLKRDKEKREKEWH 878


>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
           protein protein.
          Length = 2150

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 151 VYRTEKYQKLKVEVERQSKKLEKR-KEAH 234
           +YRTE ++K+K   ER  +  EKR KE H
Sbjct: 850 IYRTELWEKMKPVYERLKRDKEKREKEWH 878


>AL110485-7|CAB60355.1|  237|Caenorhabditis elegans Hypothetical
           protein Y46G5A.12 protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/26 (38%), Positives = 20/26 (76%)
 Frame = +1

Query: 172 QKLKVEVERQSKKLEKRKEAHGDSLD 249
           QK+ +E E+QS+ ++ ++E  GD++D
Sbjct: 123 QKIMMEFEKQSEIMDMKEEVMGDAID 148


>Z82073-5|CAB63322.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.7 protein.
          Length = 333

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = +1

Query: 457 IYLVMITQIVLSYFCTFLYNEHQTKHTKVAWFCTFSSWLQNKVVL 591
           I   + T   L  FC  ++N         +W  TFS WL    VL
Sbjct: 100 ILSALSTSSCLLLFCNSVFNIFNMLRNNKSWLRTFSEWLAWTFVL 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,249,418
Number of Sequences: 27780
Number of extensions: 247970
Number of successful extensions: 709
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)