Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0281
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   2.9  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   2.9  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    23   3.8  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   5.0  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   5.0  

>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 707 QWRRTATPDFIQILTTSRGLRPLNSEXDALNG 802
           QW R     +I ++T   GL  + S    +NG
Sbjct: 38  QWTREHVAQWINLVTQQHGLPEVPSSRFLMNG 69


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 707 QWRRTATPDFIQILTTSRGLRPLNSEXDALNG 802
           QW R     +I ++T   GL  + S    +NG
Sbjct: 38  QWTREHVAQWINLVTQQHGLPEVPSSRFLMNG 69


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 314 CRSGESPPEPLGR 352
           C +GE+P +P+GR
Sbjct: 51  CATGEAPCDPVGR 63


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 92  TSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYS-TVSRS 250
           ++PRS      SS +     S  S+   ++  RLL  +P+      YS T+  S
Sbjct: 152 STPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNS 205


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 92  TSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYS-TVSRS 250
           ++PRS      SS +     S  S+   ++  RLL  +P+      YS T+  S
Sbjct: 143 STPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNS 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,513
Number of Sequences: 336
Number of extensions: 4094
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)