Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0281
         (806 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0057 + 22410167-22411330                                         33   0.35 
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369...    31   1.4  
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647...    31   1.4  
06_02_0203 + 12986685-12988691                                         30   1.9  
03_02_1016 + 13228113-13228964                                         30   1.9  
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699...    30   2.5  
06_02_0098 + 11720417-11720806,11722151-11722348,11723088-117232...    30   2.5  
09_04_0329 + 16726501-16726750,16726843-16726930,16727280-167273...    29   4.4  
09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222           29   4.4  
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809...    29   5.8  
01_07_0081 - 40959279-40959375,40959463-40959589,40960138-409603...    29   5.8  
01_06_0241 - 27813076-27813622,27813695-27814125                       29   5.8  
10_06_0110 + 10889414-10889669,10889756-10889806,10890595-108911...    28   7.6  
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798...    28   7.6  
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772...    28   7.6  
02_03_0172 + 15965342-15965711,15967757-15967849,15967976-159680...    28   7.6  

>04_04_0057 + 22410167-22411330
          Length = 387

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 18/70 (25%), Positives = 26/70 (37%)
 Frame = +2

Query: 260 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 439
           P  A   +   P    RC  S   PP P      +  + D++ +D RKE        RS 
Sbjct: 187 PPPAAAAASPSPERSPRCQPSPPPPPPPHALVIPVEDEEDDSDEDDRKEEAVELEMLRSE 246

Query: 440 EGKEQIPERH 469
               ++P  H
Sbjct: 247 RRAARLPRSH 256


>09_02_0057 -
           3697255-3698116,3698191-3698351,3698442-3698636,
           3698728-3699126,3699208-3699477,3700102-3700695
          Length = 826

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
 Frame = +2

Query: 257 EPAEAHRDSGEEPASGQRCCRSGESPPEPLGR----S*TLRQDSDEAHDDGRKESTAPDR 424
           E     R  G     G+R     ESPP P  +    S    +DS E  D   +E+  P  
Sbjct: 60  EEESRSRRHGHHRDGGRRSLSPSESPPPPAAKRERSSSRAPRDSVERRDSADREAPPPSS 119

Query: 425 SYRSGE---GKEQIPERHRELRS 484
             R G    G E  PE  +  R+
Sbjct: 120 RKRKGHEGGGNESDPEGGKRARA 142


>01_01_0829 +
           6471032-6471870,6472490-6472685,6472772-6472956,
           6473206-6473539,6473629-6473833,6474927-6475033,
           6475117-6475269
          Length = 672

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 30/91 (32%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
 Frame = +2

Query: 74  TLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSL 253
           TLPP + SP SP T   SSK  TP+ S  S+    L       S L   RS    +    
Sbjct: 31  TLPPGRLSPVSPLTHSSSSKLPTPSSSSGSS--GSLSVSRAPASALASRRSHSGEIPLPS 88

Query: 254 IEPAE----AHRDSGEEPASGQRCCRSGESP 334
             P       HR +G  P     C  S  SP
Sbjct: 89  DGPPRGSRPGHRRTGSGPLIFTSCSSSATSP 119


>06_02_0203 + 12986685-12988691
          Length = 668

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 294 PLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTT 395
           P+P+ + +AA++AH N   G EH  K   + TTT
Sbjct: 505 PVPNSNAIAADEAHGNATAG-EHDKKETAEQTTT 537


>03_02_1016 + 13228113-13228964
          Length = 283

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +2

Query: 257 EPAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHD 391
           E A AH  +G + A+ +R C SG   P P  RS T        HD
Sbjct: 214 EAARAHASNGGKHAAARR-CSSGNHQPVPRARSTTGMDSLGHGHD 257


>07_03_1577 -
           27869596-27869682,27869769-27869869,27869956-27869995,
           27870879-27870953
          Length = 100

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = +1

Query: 112 DLKSQLEGFNTSCLRDVDTNEKIVL 186
           DL+S+L+  NT CL + + N+K+++
Sbjct: 54  DLQSKLDAVNTECLAEKEKNKKLII 78


>06_02_0098 +
           11720417-11720806,11722151-11722348,11723088-11723210,
           11723288-11723499,11723580-11723851,11723931-11724199,
           11724976-11724990
          Length = 492

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +1

Query: 679 FVQWATLPGAMATYSNPGFYSNPNDK 756
           +VQWA   GA  T S   FYS+P  K
Sbjct: 163 YVQWAQAAGANMTNSTDSFYSHPTIK 188


>09_04_0329 +
           16726501-16726750,16726843-16726930,16727280-16727333,
           16727590-16727739,16727884-16728015,16728279-16728423,
           16728514-16728552,16728638-16728712,16728935-16728994,
           16729120-16729184,16729519-16729609,16729806-16729820
          Length = 387

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 351 RPRGSGGLSPLRQHLCPEAGSSPESRCASAG 259
           R RG+ G+  LR  L P A +SP ++ A+ G
Sbjct: 54  RRRGAHGVRALRPLLLPRASASPSAKTAAGG 84


>09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222
          Length = 212

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +2

Query: 119 RVSSKASTPAVSVTSTPMKRLCFR 190
           +VSS++S+P  SVT+  ++ +CFR
Sbjct: 72  QVSSQSSSPVESVTTATLRPICFR 95


>04_04_1188 +
           31579833-31579914,31580001-31580176,31580822-31580923,
           31581015-31581245,31581821-31581922,31582092-31582184,
           31582275-31582379,31582455-31582514,31582621-31582698,
           31582778-31582924,31583011-31583109,31583178-31583267,
           31583360-31583451,31583529-31583646,31583783-31583871,
           31583998-31584088,31584203-31584294,31584442-31584749,
           31584866-31584897
          Length = 728

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
 Frame = +2

Query: 200 TSPLRRPRSLYSTVSRSLIEPA----EAHRDSGEEPASGQ--RCCRSGESPPEPLGRS*T 361
           T P +RP +  +   +S  E      E+  +SG+EP   +      SG + P P      
Sbjct: 302 TIPAKRPLTKDTKKGQSKDESEDSSDESSEESGDEPPQKKIKDSTTSGTTKPSPKATKKE 361

Query: 362 LRQDSDEAHDDGRKESTAPDRSYRSGEGKE 451
           +  D +   DD   ES+  D   +  + K+
Sbjct: 362 ISSDDESDEDDSSDESSDEDVKQKQTQAKK 391


>01_07_0081 -
           40959279-40959375,40959463-40959589,40960138-40960339,
           40962414-40963361
          Length = 457

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -3

Query: 570 VVQADFSCSMTSFVGSGFFSQFPCASA-*W-DRSSRCRSGICSFPSPLR*LR 421
           VV+  F C++ + VG G    +P      W D  SRC  G  SF SP+R +R
Sbjct: 152 VVEMLFRCNILALVGGGDAPHYPPNKVMIWDDHQSRC-IGELSFRSPVRGVR 202


>01_06_0241 - 27813076-27813622,27813695-27814125
          Length = 325

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +2

Query: 365 RQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRSH 487
           R + +  H+   ++S   +RS+R+     ++ + HR  RSH
Sbjct: 21  RVEPEANHESANQQSHHSNRSHRTASRNAEVEQPHRSNRSH 61


>10_06_0110 +
           10889414-10889669,10889756-10889806,10890595-10891163,
           10891178-10891660,10891747-10891944,10893300-10893354,
           10893372-10893631
          Length = 623

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
 Frame = +2

Query: 95  SPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPL----RRPRSLYSTVSRSLIEP 262
           SP +      SS    P +++ + P  R       + PL    R  R   + V+R  IEP
Sbjct: 10  SPEANTLSPTSSPLPLPPITIHAPPFTRALHHAASSFPLLSQHRSHRWKGAAVARIGIEP 69

Query: 263 AEAHRDSGEEPAS 301
           A   R   EEP S
Sbjct: 70  AMGRRQQPEEPDS 82


>09_04_0087 +
           14476539-14476675,14478876-14479635,14479720-14479871,
           14479958-14480024,14480632-14480831,14480915-14481068,
           14481585-14481669,14481766-14481857,14482575-14482766,
           14482867-14482992,14483072-14483125,14483494-14483550,
           14484509-14484606,14484703-14485038,14485116-14485203,
           14486891-14487016,14487082-14487138,14488054-14488133,
           14488228-14488270,14488948-14489034,14489331-14489420,
           14489996-14490054,14490141-14490231,14490330-14490495,
           14490662-14490755,14491787-14492909
          Length = 1537

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
 Frame = +2

Query: 257 EPAEAHRDSGE-EPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYR 433
           E  E H ++GE +  +G++C  +G  P + +     +   +  A    ++E T  D    
Sbjct: 149 ENGEKHEENGEKQNENGEKCEENGGKPAQ-ISDDQAVNGCNGSADKKDKEEETEKDNEKE 207

Query: 434 SGEGKEQIP---ERHRELRSH*AEAHGNCEKNPLPTKDVIEQEK 556
             + +E+     E+ +E +    +     EK  L   D  E+EK
Sbjct: 208 KEDKEEETEKDNEKEKEDKEEETKKDNEKEKEQLMGTDEKEKEK 251


>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
            23877577-23878212,23878328-23878573,23878669-23878834,
            23878863-23879076,23879580-23880097,23880617-23880683,
            23882131-23882215,23882292-23882367,23882593-23882756,
            23883088-23883217,23883314-23883430,23883505-23883600,
            23883732-23884009,23886571-23886794,23886935-23887011,
            23887103-23887145,23887231-23887288,23888371-23888410,
            23888891-23889418
          Length = 1444

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +2

Query: 260  PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 439
            P E ++DS +   S      + ESP      S   +  S  +HDD R+  T PD S R+G
Sbjct: 1312 PGEPYQDSNKTDPSTP--VPTSESPIRDKAGSGLFKTIS--SHDDCREPLT-PDSSCRAG 1366

Query: 440  EGKEQIPERHRELR-SH*AEAHGNCEKNP 523
               E  P   + +R S   +  GN E  P
Sbjct: 1367 SPLESPPRASKRIRVSSDIDHRGNNEFPP 1395


>02_03_0172 +
           15965342-15965711,15967757-15967849,15967976-15968060,
           15968749-15968824,15968992-15969120,15969473-15969571,
           15969661-15969762,15970257-15970415,15970507-15970602,
           15971497-15971647,15971782-15971893,15972004-15972074,
           15972548-15972984,15973421-15973492,15973713-15973810,
           15974350-15974425,15975512-15975634,15975776-15975844
          Length = 805

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 332 PPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPER 466
           PP P GR    RQ  +    DG+ +    D S RS +G    P++
Sbjct: 89  PPPPRGRRRVTRQFWNAGDYDGKPDLLGGDPSLRSDDGGGMDPDK 133


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,220,198
Number of Sequences: 37544
Number of extensions: 492805
Number of successful extensions: 1617
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)