Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0280
         (703 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498F50 Cluster: hypothetical protein 4.t00079; n...    33   9.0  

>UniRef50_UPI0000498F50 Cluster: hypothetical protein 4.t00079; n=3;
           Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 4.t00079 - Entamoeba histolytica HM-1:IMSS
          Length = 505

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -1

Query: 658 FLEPNTKIILDKLQETKNKNIEIYYDKVINN-FRSMIINIK 539
           +LE   KI+ D ++E  N+ +EI Y +VIN    + I+NIK
Sbjct: 141 YLEEVIKIMKDIMKEESNQEVEILYIEVINQMIETRIMNIK 181


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,917,245
Number of Sequences: 1657284
Number of extensions: 9640927
Number of successful extensions: 23739
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 22733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23728
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)