Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0280
(703 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 25 0.70
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 25 0.70
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 25 0.70
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 25 0.70
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 25 0.70
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 25 0.70
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 25 0.70
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 25 0.70
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 25 0.70
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 25 0.70
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 25 0.92
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 2.1
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 2.1
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 2.1
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.8
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 3.7
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 4.9
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 6.5
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.6
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.70
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 129 KAAGRNFSGSSKKSPEKISINNNHFTNTYYISSYIISFHLVSPS*LISQINHLHFISLHN 308
K RN + + KI NNN +N Y ++ +++ + + L IN++ I +
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPV 123
Query: 309 IIY 317
+Y
Sbjct: 124 PVY 126
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.70
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 129 KAAGRNFSGSSKKSPEKISINNNHFTNTYYISSYIISFHLVSPS*LISQINHLHFISLHN 308
K RN + + KI NNN +N Y ++ +++ + + L IN++ I +
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPV 123
Query: 309 IIY 317
+Y
Sbjct: 124 PVY 126
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.70
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 129 KAAGRNFSGSSKKSPEKISINNNHFTNTYYISSYIISFHLVSPS*LISQINHLHFISLHN 308
K RN + + KI NNN +N Y ++ +++ + + L IN++ I +
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPV 123
Query: 309 IIY 317
+Y
Sbjct: 124 PVY 126
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.70
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 129 KAAGRNFSGSSKKSPEKISINNNHFTNTYYISSYIISFHLVSPS*LISQINHLHFISLHN 308
K RN + + KI NNN +N Y ++ +++ + + L IN++ I +
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPV 123
Query: 309 IIY 317
+Y
Sbjct: 124 PVY 126
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.70
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 129 KAAGRNFSGSSKKSPEKISINNNHFTNTYYISSYIISFHLVSPS*LISQINHLHFISLHN 308
K RN + + KI NNN +N Y ++ +++ + + L IN++ I +
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPV 123
Query: 309 IIY 317
+Y
Sbjct: 124 PVY 126
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.70
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 129 KAAGRNFSGSSKKSPEKISINNNHFTNTYYISSYIISFHLVSPS*LISQINHLHFISLHN 308
K RN + + KI NNN +N Y ++ +++ + + L IN++ I +
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPV 123
Query: 309 IIY 317
+Y
Sbjct: 124 PVY 126
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.70
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 129 KAAGRNFSGSSKKSPEKISINNNHFTNTYYISSYIISFHLVSPS*LISQINHLHFISLHN 308
K RN + + KI NNN +N Y ++ +++ + + L IN++ I +
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPV 123
Query: 309 IIY 317
+Y
Sbjct: 124 PVY 126
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.70
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 129 KAAGRNFSGSSKKSPEKISINNNHFTNTYYISSYIISFHLVSPS*LISQINHLHFISLHN 308
K RN + + KI NNN +N Y ++ +++ + + L IN++ I +
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPV 123
Query: 309 IIY 317
+Y
Sbjct: 124 PVY 126
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.0 bits (52), Expect = 0.70
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 129 KAAGRNFSGSSKKSPEKISINNNHFTNTYYISSYIISFHLVSPS*LISQINHLHFISLHN 308
K RN + + KI NNN +N Y ++ +++ + + L IN++ I +
Sbjct: 297 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPV 356
Query: 309 IIY 317
+Y
Sbjct: 357 PVY 359
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.0 bits (52), Expect = 0.70
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 129 KAAGRNFSGSSKKSPEKISINNNHFTNTYYISSYIISFHLVSPS*LISQINHLHFISLHN 308
K RN + + KI NNN +N Y ++ +++ + + L IN++ I +
Sbjct: 297 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPV 356
Query: 309 IIY 317
+Y
Sbjct: 357 PVY 359
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 0.92
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 129 KAAGRNFSGSSKKSPEKISINNNHFTNTYYISSYIISFHLVSPS*LISQINHLHFISLHN 308
K RN + + KI NNN +N Y ++ +++ + + L IN++ I +
Sbjct: 64 KERSRNRTERERSKEPKIISNNNPLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPV 123
Query: 309 IIY 317
+Y
Sbjct: 124 PVY 126
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 424 VTTMNSDLNKISIVHSLD*HIGTFY 498
+++ N+ L KIS V S+D ++GT +
Sbjct: 267 MSSTNAALPKISYVKSIDVYLGTCF 291
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 424 VTTMNSDLNKISIVHSLD*HIGTFY 498
+++ N+ L KIS V S+D ++GT +
Sbjct: 267 MSSTNAALPKISYVKSIDVYLGTCF 291
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 177 KISINNNHFTNTYYISSYIISFHLV 251
K + NNN++ Y +YII+ +
Sbjct: 103 KYNYNNNNYNKKLYYKNYIINIEQI 127
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 424 VTTMNSDLNKISIVHSLD*HIGTFY 498
+++ N+ L KIS V S+D ++GT +
Sbjct: 206 MSSTNAALPKISYVKSIDVYLGTCF 230
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 129 KAAGRNFSGSSKKSPEKISINNNHFTNTY-YISSY 230
K RN + + KI NNN +N Y Y ++Y
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNY 98
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 22.6 bits (46), Expect = 3.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 183 SINNNHFTNTYYISSY 230
+I N+ T TY++S+Y
Sbjct: 9 NITNSSITETYFVSAY 24
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 183 SINNNHFTNTYYISSYIISF 242
S+N +F N I SY+I F
Sbjct: 290 SLNGKNFNNDDDIKSYLIQF 309
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 6.5
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -1
Query: 703 PIFPTSFNLHHASA*FLEPNTKIILDKLQETKNKNIEIYYDKVINN 566
PIF T +L +A + N K+ILD L + ++ INN
Sbjct: 92 PIFGTIKDLEDLTAEAKKQNLKVILD-LVPNHTSDQHKWFQMSINN 136
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 358 KVVVTRS*NTLKNVKARYSYLFVTTMNSDLNK 453
K++ + S NT+ N +Y+Y N++ NK
Sbjct: 79 KIISSLSNNTIHNNNYKYNYNNNNYNNNNYNK 110
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 358 KVVVTRS*NTLKNVKARYSYLFVTTMNSDLNK 453
K++ + S NT+ N +Y+Y N++ NK
Sbjct: 79 KIISSLSNNTIHNNNYKYNYNNNNYNNNNYNK 110
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,409
Number of Sequences: 438
Number of extensions: 3885
Number of successful extensions: 25
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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