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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0279
         (742 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)              76   3e-14
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)                  61   1e-09
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)               60   2e-09
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)                  56   2e-08
SB_43842| Best HMM Match : RNB (HMM E-Value=0)                         52   4e-07
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)                  50   3e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)            48   6e-06
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   4e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)                42   4e-04
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.004
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.015
SB_52320| Best HMM Match : DEAD (HMM E-Value=0)                        37   0.020
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.020
SB_9558| Best HMM Match : DEAD (HMM E-Value=0)                         33   0.24 
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)               33   0.32 
SB_37351| Best HMM Match : DEAD (HMM E-Value=0)                        31   0.74 
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)                  31   0.74 
SB_17563| Best HMM Match : DEAD (HMM E-Value=0)                        31   0.74 
SB_2247| Best HMM Match : DEAD (HMM E-Value=0)                         31   0.74 
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)                   31   0.98 
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.98 
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.98 
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.3  
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)                         30   2.3  
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)                  29   3.0  
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)                29   3.0  
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)              29   4.0  
SB_52835| Best HMM Match : vATP-synt_E (HMM E-Value=2.1e-05)           28   9.1  

>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 790

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 40/129 (31%), Positives = 61/129 (47%)
 Frame = +3

Query: 240 PRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 419
           P    +  +PFNKNFY+ HP + K+S  E+++ R    + VSG     P   F    F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526

Query: 420 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PKRVPAKRWPTSCQPLCT*TTNRLFR 599
            +   ++ + Y +PT IQ Q  PIA+SG++ +   K    K        L         +
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586

Query: 600 RGDGPIALV 626
            GDGPI L+
Sbjct: 587 VGDGPIVLI 595


>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
          Length = 690

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = +3

Query: 312 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 479
           R  +EV+ YR + ++TV+G  V  P+  FEE+ FPDY+Q   K  G+ EPT IQAQ
Sbjct: 57  RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112


>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 592

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
 Frame = +3

Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 431
           V  QPF K+FY   P + K +P E +E+R + E + V G     P++ + +      +  
Sbjct: 59  VVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILD 118

Query: 432 GVKTMGYKEPTPIQAQGWPIAMSGKN*LA---*PKRVPAKRWPTSCQPLC 572
            +K   Y++PTPIQAQ  P+ MSG++ +A    P R  A +    C+  C
Sbjct: 119 VLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFC 168


>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
          Length = 500

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 27/91 (29%), Positives = 47/91 (51%)
 Frame = +3

Query: 285 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 464
           Y  HPT+   +  +V++ R+  E+ V G  V +P+  F   +F + + + +   GY  PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220

Query: 465 PIQAQGWPIAMSGKN*LA*PKRVPAKRWPTS 557
           PIQ Q  P+ +SG++ +        K  P+S
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLLPSS 251


>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
          Length = 1238

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
 Frame = +3

Query: 270 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 449
           F  ++YD +  V + S   V+E R  + + + G +   PI+ F + N P  +   +    
Sbjct: 32  FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91

Query: 450 YKEPTPIQAQGWPIAMSGKN*LA*PKRVPAKRWPTSCQPLC-T*TTNRLFRRGDGPIALV 626
           ++ PTPIQ Q     MSG++ +   +    K    S  PLC    T      GD P+AL+
Sbjct: 92  FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSL-PLCMLLRTKAPSNPGDTPVALI 150

Query: 627 L 629
           L
Sbjct: 151 L 151


>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
          Length = 428

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 20/58 (34%), Positives = 35/58 (60%)
 Frame = +3

Query: 336 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
           +R +  ++  G  +  PI+ ++EA  PD + + V  +GYK+PTPIQ Q  PI +  ++
Sbjct: 83  FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRD 140



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = +2

Query: 503 KELVGVAKTGSGKTLAYILPAIVHINNQPPI 595
           ++++GVA+TGSGKT A+ +P +V I   P I
Sbjct: 139 RDIIGVAETGSGKTAAFAIPLLVWIMGLPKI 169


>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
          Length = 1058

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
 Frame = +3

Query: 324 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 491
           ++  +R+   + V G +V +P++ F    E   FPDY+   V+  GY  PTPIQ Q  P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196

Query: 492 AMSG 503
              G
Sbjct: 197 MAHG 200


>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1170

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 22/56 (39%), Positives = 31/56 (55%)
 Frame = +3

Query: 351 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
           EV VSG      I  FEEAN  +     V+   YK+PTP+Q    PI ++G++ +A
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 753



 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = +2

Query: 503 KELVGVAKTGSGKTLAYILPAIVHINN 583
           ++++  A+TGSGKT A++LP +  + N
Sbjct: 749 RDVMACAQTGSGKTAAFLLPVMTSMMN 775


>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
          Length = 185

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 22/56 (39%), Positives = 31/56 (55%)
 Frame = +3

Query: 351 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
           EV VSG      I  FEEAN  +     V+   YK+PTP+Q    PI ++G++ +A
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 176


>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 797

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 30/122 (24%), Positives = 49/122 (40%)
 Frame = +3

Query: 360 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PKRVPA 539
           VSG      I  F E  F + +   +   GY+ PTP+Q    PI M+G++ +A  +    
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528

Query: 540 KRWPTSCQPLCT*TTNRLFRRGDGPIALVLGAYQRVSTTNFSKLLQIXGHTSYGS*HVCV 719
           K        L +     L      P+AL +   + ++   + +  +   HT      VC 
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPI-KVCVCY 587

Query: 720 GG 725
           GG
Sbjct: 588 GG 589


>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1448

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +2

Query: 437 KDNGLQRTDAHSSSRLADSYVWKELVGVAKTGSGKTLAYILPAI 568
           KD G           +A     ++L+G AKTGSGKTLA+++P +
Sbjct: 588 KDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVV 631


>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 340

 Score = 36.7 bits (81), Expect = 0.020
 Identities = 19/45 (42%), Positives = 28/45 (62%)
 Frame = +2

Query: 503 KELVGVAKTGSGKTLAYILPAIVHINNQPPISER*WSDCFGLGRL 637
           ++++G AKTGSGKTLA+++P I  +  Q       W+   GLG L
Sbjct: 88  RDVLGAAKTGSGKTLAFLIPIIETLWRQK------WTSMDGLGAL 126



 Score = 33.1 bits (72), Expect = 0.24
 Identities = 25/98 (25%), Positives = 43/98 (43%)
 Frame = +3

Query: 387 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PKRVPAKRWPTSCQP 566
           ++ F +         G+   G+  PT IQ QG P+A+SG++ L   K    K       P
Sbjct: 49  VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTL-AFLIP 107

Query: 567 LCT*TTNRLFRRGDGPIALVLGAYQRVSTTNFSKLLQI 680
           +      + +   DG  ALV+   + ++   F  L++I
Sbjct: 108 IIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKI 145


>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 697

 Score = 36.7 bits (81), Expect = 0.020
 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +2

Query: 440 DNGLQRTDAHSSSRLADSYVW-KELVGVAKTGSGKTLAYILPAIVHI 577
           D G  +     S  +  + ++ ++++G A+TGSGKTLA+ +P I HI
Sbjct: 147 DQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHI 193


>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 436

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 503 KELVGVAKTGSGKTLAYILPAIVHINNQP 589
           ++ +G AKTGSGKT A+ LP +  + + P
Sbjct: 45  RDCIGCAKTGSGKTAAFALPILQKLCDDP 73


>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
          Length = 238

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +2

Query: 503 KELVGVAKTGSGKTLAYILPAIVHINNQP 589
           K+++G+A+TGSGKT A+ LP +  + + P
Sbjct: 2   KDVIGLAETGSGKTGAFALPILQALLDNP 30


>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 688

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +2

Query: 437 KDNGLQRTDAHSSSRLADSYVWKELVGVAKTGSGKTLAYILPAI 568
           +D G+       +S     Y  ++++G A+TG+GKTL++ LP +
Sbjct: 89  EDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLV 132


>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
          Length = 456

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 503 KELVGVAKTGSGKTLAYILPAIVHINNQPPISE 601
           +++ GVA  GSGK LAY+LP I  I       E
Sbjct: 225 RDVAGVAIEGSGKRLAYLLPIIHQITESSVYQE 257


>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 439

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +3

Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PKRVPAK 542
           FE+      +  G+   G+ +P+PIQ +  P+A++G++ LA  K    K
Sbjct: 49  FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97


>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 439

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +3

Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PKRVPAK 542
           FE+      +  G+   G+ +P+PIQ +  P+A++G++ LA  K    K
Sbjct: 49  FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97


>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
          Length = 96

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 429 QGVKTMGYKEPTPIQAQGWPIAMSGKN 509
           + V  +G+  PTPIQA   P+A+ GK+
Sbjct: 23  RAVNELGFLHPTPIQASTIPVALMGKD 49



 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = +2

Query: 473 SSRLADSYVWKELVGVAKTGSGKTLAYILPAIVHINNQP 589
           +S +  + + K++   A TG+GKT A++LP +  +  +P
Sbjct: 38  ASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP 76


>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1375

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 387  IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
            I  FE+ +  + +   V   GYK+PTP+Q    PI    ++ +A
Sbjct: 874  ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMA 917



 Score = 31.1 bits (67), Expect = 0.98
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 503  KELVGVAKTGSGKTLAYILPAIVHINNQPP 592
            ++L+  A+TGSGKT A+++P +  I  + P
Sbjct: 913  RDLMACAQTGSGKTAAFLIPILSRIYMEGP 942


>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1039

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 11/20 (55%), Positives = 18/20 (90%)
 Frame = +2

Query: 503 KELVGVAKTGSGKTLAYILP 562
           K++V +A+TGSGKT A+++P
Sbjct: 319 KDVVAMARTGSGKTAAFLIP 338


>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 480

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 372 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 485
           ++H P++   +  FP Y +       Y  P P QA  W
Sbjct: 6   DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43


>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
          Length = 675

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 282 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 422
           + D    VL     E EE  NN  H++ +  + +HNP  YFE+ +  DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264


>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
          Length = 978

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +2

Query: 509 LVGVAKTGSGKTLAYILPAIVH 574
           ++  A+TGSGKTLAY+ P +VH
Sbjct: 418 VICAAQTGSGKTLAYLAP-LVH 438


>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
          Length = 493

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = -1

Query: 175 YCHRCQIEKNYRRICCLL----QIWNHRFHGYYSSYQT*LFF 62
           +CHR Q   NY   C ++    Q+W+H +    SS ++ +F+
Sbjct: 178 FCHRQQYRHNYYNSCLVITFFRQMWDHLWANVGSSVESSVFY 219


>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
          Length = 490

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 348 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 500
           HEV V   +  +P+   + FEE      +++GV  MG+ +P+ IQ    P+ ++
Sbjct: 86  HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139


>SB_52835| Best HMM Match : vATP-synt_E (HMM E-Value=2.1e-05)
          Length = 288

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 23/72 (31%), Positives = 30/72 (41%)
 Frame = +1

Query: 385 LFNTLKKQIFLIMCNKV*RQWVTKNRRPFKLKAGR*LCLERISWRSQNGFRQNVGLHLAS 564
           L+  L+ ++ LI C K     V    +P K  A        +    Q GFR N  + LA 
Sbjct: 107 LYQLLESKV-LIRCRKQDVSLVKVGVKPLKTHAVSGTYRGGVQMDPQPGFRVNKKITLAG 165

Query: 565 HCAHKQPTAYFG 600
           H  H   TA FG
Sbjct: 166 HTVHIN-TAVFG 176


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,685,783
Number of Sequences: 59808
Number of extensions: 487216
Number of successful extensions: 1291
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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