Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0279
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 54 8e-08
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 2e-04
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 43 3e-04
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 42 3e-04
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 42 3e-04
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 42 3e-04
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 42 3e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 40 0.001
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 36 0.030
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 35 0.070
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 35 0.070
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 35 0.070
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 34 0.092
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.092
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.092
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 34 0.092
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.37
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 31 0.65
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 31 0.65
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 31 0.86
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 31 0.86
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 31 0.86
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 31 0.86
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 31 1.1
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 31 1.1
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 30 1.5
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 30 1.5
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 30 1.5
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 30 1.5
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 30 2.0
AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical ... 30 2.0
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 2.0
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 29 2.6
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 29 2.6
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 29 2.6
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 2.6
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF016421-8|AAO12431.1| 230|Caenorhabditis elegans Hypothetical ... 28 8.0
AF016421-7|AAO12430.1| 413|Caenorhabditis elegans Hypothetical ... 28 8.0
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 28 8.0
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 28 8.0
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 70.5 bits (165), Expect = 1e-12
Identities = 40/124 (32%), Positives = 66/124 (53%)
Frame = +3
Query: 258 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 437
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 438 KTMGYKEPTPIQAQGWPIAMSGKN*LA*PKRVPAKRWPTSCQPLCT*TTNRLFRRGDGPI 617
+++PT IQ+ WPIAMSG++ ++ K K L T +RG+GP
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPA 204
Query: 618 ALVL 629
LVL
Sbjct: 205 VLVL 208
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/28 (60%), Positives = 25/28 (89%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIVHINNQ 586
++++ +AKTGSGKTLA++LPA+VHI Q
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQ 194
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/125 (26%), Positives = 60/125 (48%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 434
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 435 VKTMGYKEPTPIQAQGWPIAMSGKN*LA*PKRVPAKRWPTSCQPLCT*TTNRLFRRGDGP 614
++ Y++PTPIQA P A+SG++ L K K + + G+GP
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGP 339
Query: 615 IALVL 629
+A+++
Sbjct: 340 VAVIV 344
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +3
Query: 336 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRD 340
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIVHINNQPPISER 604
++++GVA+TGSGKT A++LP +V I + P + +
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQ 372
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 54.4 bits (125), Expect = 8e-08
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 431
V + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 432 GVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PKRVPAKRWPTSCQPLCT*TTNRLFRRGDG 611
+K Y +PT IQAQ P MSG++ + K K GDG
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDG 377
Query: 612 PIALVLGAYQRVSTTNFSK 668
PIA++L + ++ + +
Sbjct: 378 PIAVILAPTRELAMQTYKE 396
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIVHINNQPPISE 601
++++G+AKTGSGKTLA++LP HI +QP + E
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEE 374
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 354 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
V +G +V PI F + + +++++ +KT GY PTP+Q P G++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRD 205
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIVHINNQPP 592
++L+ A+TGSGKT A+++P + I P
Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLVNAILQDGP 233
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +2
Query: 437 KDNGLQRTDAHSSSRLADSYVWKELVGVAKTGSGKTLAYILPAIVHINNQ 586
+ NG ++ S ++ +GV++TGSGKTLA++LPA++HI+ Q
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQ 149
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Frame = +3
Query: 252 FVSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 410
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 411 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKN 509
+ G ++ G+++P+PIQ+Q WP+ +SG++
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQD 123
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 345 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIVHI 577
++L+ A+TGSGKT A++LP I HI
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHI 201
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 345 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIVHI 577
++L+ A+TGSGKT A++LP I HI
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHI 185
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 345 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIVHI 577
++L+ A+TGSGKT A++LP I HI
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHI 182
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 42.3 bits (95), Expect = 3e-04
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Frame = +3
Query: 291 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 467
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 468 IQAQGWPIAMSGKN*LA*PKRVPAKRWPTSCQPL---CT*TTNRL-FRRGDGPIALVLGA 635
IQ QG P+A+SG++ + K T PL C +L F R +GP L++
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTM-TFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVP 274
Query: 636 YQRVSTTNFSKLLQI---XGHTSYGS*H--VCVGGAP 731
+ ++ F ++++ G +C+GG P
Sbjct: 275 SRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVP 311
Score = 34.3 bits (75), Expect = 0.092
Identities = 10/23 (43%), Positives = 20/23 (86%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIV 571
++++G+A TGSGKT+ ++LP ++
Sbjct: 228 RDMIGIASTGSGKTMTFVLPLVM 250
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/67 (35%), Positives = 33/67 (49%)
Frame = +2
Query: 437 KDNGLQRTDAHSSSRLADSYVWKELVGVAKTGSGKTLAYILPAIVHINNQPPISER*WSD 616
KDN + +A S ++VG AKTGSGKTLA ++P + + WS
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL------EALWRAKWSP 145
Query: 617 CFGLGRL 637
+GLG L
Sbjct: 146 DYGLGAL 152
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 35.9 bits (79), Expect = 0.030
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAI 568
K+++ AKTGSGKTLA++LPAI
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI 127
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 34.7 bits (76), Expect = 0.070
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILP 562
K+++ A+TGSGKT A++LP
Sbjct: 336 KDILACAQTGSGKTAAFLLP 355
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 34.7 bits (76), Expect = 0.070
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILP 562
K+++ A+TGSGKT A++LP
Sbjct: 336 KDILACAQTGSGKTAAFLLP 355
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
FE+ N + + GY +PTPIQ P+A++GK+
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKD 187
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIVHINNQP 589
K++ A TG+GKT A++LP + + +P
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP 214
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 34.3 bits (75), Expect = 0.092
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 434 CKDNGLQRTDAHSSSRLADSYVWKELVGVAKTGSGKTLAYILPAIVHINNQP 589
C+ G + + L + K+++G+A+TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP 110
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 34.3 bits (75), Expect = 0.092
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 506 ELVGVAKTGSGKTLAYILPAIVHI 577
+++ A+TGSGKT A++LP + +
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRL 403
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 34.3 bits (75), Expect = 0.092
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 506 ELVGVAKTGSGKTLAYILPAIVHI 577
+++ A+TGSGKT A++LP + +
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRL 403
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 34.3 bits (75), Expect = 0.092
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 506 ELVGVAKTGSGKTLAYILPAIVHI 577
+++ A+TGSGKT A++LP + +
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRL 403
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIVHINNQP 589
+++ A TGSGKT+ Y+LP + + ++P
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKP 185
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +2
Query: 506 ELVGVAKTGSGKTLAYILPAIVHINNQP 589
+++G A+TG+GKTLA+ +P + ++ P
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP 155
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +2
Query: 506 ELVGVAKTGSGKTLAYILPAIVHINNQP 589
+++G A+TG+GKTLA+ +P + ++ P
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP 155
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 31.1 bits (67), Expect = 0.86
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIVHI 577
++++G A+TGSGKTLA+ +P + +
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARL 51
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 31.1 bits (67), Expect = 0.86
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIVHI 577
++++G A+TGSGKTLA+ +P + +
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARL 218
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 31.1 bits (67), Expect = 0.86
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 506 ELVGVAKTGSGKTLAYILPAIVHI 577
++V A TGSGKTLA+++P ++ +
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKL 798
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 31.1 bits (67), Expect = 0.86
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 506 ELVGVAKTGSGKTLAYILPAIVHI 577
++V A TGSGKTLA+++P ++ +
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKL 798
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/22 (45%), Positives = 19/22 (86%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAI 568
K++V +++TGSGKT A+++P +
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPML 83
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 378 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
H +++ V + ++ G+ +PTPIQ + P M GK+ +A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/22 (45%), Positives = 19/22 (86%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAI 568
K++V +++TGSGKT A+++P +
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPML 83
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 378 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
H +++ V + ++ G+ +PTPIQ + P M GK+ +A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -2
Query: 270 KVGAKRIPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 91
++G K ++ H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 90 IPVTRHDYFSDLVEDVYLNYGFFLTQ 13
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -2
Query: 270 KVGAKRIPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 91
++G K ++ H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 90 IPVTRHDYFSDLVEDVYLNYGFFLTQ 13
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -2
Query: 270 KVGAKRIPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 91
++G K ++ H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 90 IPVTRHDYFSDLVEDVYLNYGFFLTQ 13
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -2
Query: 270 KVGAKRIPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 91
++G K ++ H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 90 IPVTRHDYFSDLVEDVYLNYGFFLTQ 13
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAI 568
K ++G A+TGSGKT A+++P +
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLV 148
>AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical
protein C48E7.8 protein.
Length = 820
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -3
Query: 587 VGCLCAQWLARCRPTFCRNPFWLRQLILSRHSYRPALSLNGRRFFV 450
+G ++L+ C C P W +LI S + P LS G FF+
Sbjct: 67 IGKSALKFLSECSSNTCLEPNWAVRLIDSLPTKPPGLSRKGPFFFI 112
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 12 PASERIHSLNKHLQLNPKNNHVW 80
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 506 ELVGVAKTGSGKTLAYILPAIVHINN 583
++V + TGSGKTLA++LP + I N
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQN 73
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +2
Query: 506 ELVGVAKTGSGKTLAYILPAIVHINNQPPISER*WSDCF 622
+++ A+TGSGKT A++LP + + ++ ++ C+
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCY 629
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +2
Query: 506 ELVGVAKTGSGKTLAYILPAIVHINNQPPISER*WSDCF 622
+++ A+TGSGKT A++LP + + ++ ++ C+
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCY 629
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 518
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +2
Query: 506 ELVGVAKTGSGKTLAYILPAIVHINNQPPISER*WSDCF 622
+++ A+TGSGKT A++LP + + ++ ++ C+
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCY 629
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 503 KELVGVAKTGSGKTLAYILPAIVHI 577
+ ++ A TGSGKTLA+ LP I I
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEI 188
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 527 TGSGKTLAYILPAIVH 574
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 153 RRIIAEFVASSKFGTTVSTAIIPV 82
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 153 RRIIAEFVASSKFGTTVSTAIIPV 82
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>AF016421-8|AAO12431.1| 230|Caenorhabditis elegans Hypothetical
protein F44E7.5b protein.
Length = 230
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -2
Query: 462 SVLCNPLSLHLVAHNQENL--LLQSIE*DYEPQLHLQLPRDYFC 337
S+ +P SL L++ + L L+Q + YE LH+ LP+D C
Sbjct: 14 SLADHPPSLCLLSKSSSKLRELVQFVIGHYEAHLHITLPKDECC 57
>AF016421-7|AAO12430.1| 413|Caenorhabditis elegans Hypothetical
protein F44E7.5a protein.
Length = 413
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -2
Query: 462 SVLCNPLSLHLVAHNQENL--LLQSIE*DYEPQLHLQLPRDYFC 337
S+ +P SL L++ + L L+Q + YE LH+ LP+D C
Sbjct: 14 SLADHPPSLCLLSKSSSKLRELVQFVIGHYEAHLHITLPKDECC 57
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 509 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNSTYSYLVIISVLF 330
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 329 D 327
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 509 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNSTYSYLVIISVLF 330
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 329 D 327
+
Sbjct: 86 N 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,765,603
Number of Sequences: 27780
Number of extensions: 367911
Number of successful extensions: 1207
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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