Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0278
(629 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VYJ3 Cluster: CG32647-PA, isoform A; n=1; Drosophila ... 140 3e-32
UniRef50_Q29FT1 Cluster: GA17040-PA; n=2; Diptera|Rep: GA17040-P... 140 3e-32
UniRef50_UPI0000D56113 Cluster: PREDICTED: similar to CG32647-PA... 124 2e-27
UniRef50_UPI00003BFD63 Cluster: PREDICTED: similar to CG32647-PA... 101 1e-20
UniRef50_Q16UR5 Cluster: Type II collagen, putative; n=1; Aedes ... 53 5e-06
UniRef50_P98153 Cluster: Integral membrane protein DGCR2/IDD pre... 42 0.009
UniRef50_UPI00015B576D Cluster: PREDICTED: similar to type II co... 40 0.065
UniRef50_UPI0000DB7180 Cluster: PREDICTED: similar to CG4285-PA;... 40 0.065
UniRef50_Q0KI70 Cluster: CG34128-PA; n=1; Drosophila melanogaste... 37 0.35
UniRef50_Q4S3L6 Cluster: Chromosome 1 SCAF14749, whole genome sh... 36 1.1
UniRef50_Q9HFI9 Cluster: Putative uncharacterized protein B2J23.... 36 1.1
UniRef50_Q3JX98 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_Q10A18 Cluster: Expressed protein; n=1; Oryza sativa (j... 35 1.4
UniRef50_Q4WNW0 Cluster: Killer toxin sensitivity protein (IKI3)... 35 1.9
UniRef50_O84843 Cluster: Phenylalanyl-tRNA synthetase alpha chai... 34 2.4
UniRef50_A4S8R6 Cluster: Predicted protein; n=2; Ostreococcus lu... 33 4.3
UniRef50_Q3SY56 Cluster: Transcription factor Sp6; n=11; Tetrapo... 33 4.3
UniRef50_Q97FQ7 Cluster: Glutamyl-tRNA(Gln) amidotransferase sub... 33 5.7
UniRef50_UPI0000E24C47 Cluster: PREDICTED: hypothetical protein;... 33 7.5
UniRef50_A6U977 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q0UPD2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q14847 Cluster: LIM and SH3 domain protein 1; n=44; Eut... 33 7.5
UniRef50_Q5SIY0 Cluster: Dihydroxy-acid dehydratase; n=7; Bacter... 33 7.5
UniRef50_UPI0000D997E8 Cluster: PREDICTED: hypothetical protein;... 32 9.9
UniRef50_A2VUD4 Cluster: Helix-turn-helix protein; n=1; Burkhold... 32 9.9
>UniRef50_Q9VYJ3 Cluster: CG32647-PA, isoform A; n=1; Drosophila
melanogaster|Rep: CG32647-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 233
Score = 140 bits (339), Expect = 3e-32
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = +3
Query: 6 MEEDCVDWEGKSVLHGLLYXXXXXXXXXXXXYHSEPMWCKAIYCDPPYFCKNFRVGERCC 185
+EEDCVD++G V HG+LY YHSEP+WCKAIYCDPPYFCKNFRVGERCC
Sbjct: 118 LEEDCVDFQGNKVNHGMLYVPGPGVCSLCVCYHSEPLWCKAIYCDPPYFCKNFRVGERCC 177
Query: 186 EFECLDPPGEDTRYRERQRLRA 251
EFECLDPPGED Y+ER R RA
Sbjct: 178 EFECLDPPGEDKLYQERMRKRA 199
>UniRef50_Q29FT1 Cluster: GA17040-PA; n=2; Diptera|Rep: GA17040-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 263
Score = 140 bits (339), Expect = 3e-32
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = +3
Query: 6 MEEDCVDWEGKSVLHGLLYXXXXXXXXXXXXYHSEPMWCKAIYCDPPYFCKNFRVGERCC 185
+EEDCVD++G V HG+LY YHSEP+WCKAIYCDPPYFCKNFRVGERCC
Sbjct: 148 LEEDCVDFQGNKVNHGMLYVPGPGVCSLCVCYHSEPLWCKAIYCDPPYFCKNFRVGERCC 207
Query: 186 EFECLDPPGEDTRYRERQRLRA 251
EFECLDPPGED Y+ER R RA
Sbjct: 208 EFECLDPPGEDKLYQERMRKRA 229
>UniRef50_UPI0000D56113 Cluster: PREDICTED: similar to CG32647-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG32647-PA, isoform A - Tribolium castaneum
Length = 158
Score = 124 bits (299), Expect = 2e-27
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Frame = +3
Query: 6 MEEDCVDWEGKSVLHGLLYXXXXXXXXXXXXYHSEPMWCKAIYCDPPYFCKNFRVGERCC 185
+EEDC D++G+++ HGLLY YHSEPMWCKAIYCDPPYFCK FRVGERCC
Sbjct: 49 IEEDCTDFQGQTIAHGLLYVPGPAVCTMCVCYHSEPMWCKAIYCDPPYFCKEFRVGERCC 108
Query: 186 EFECLDPPGEDT-----RYRERQRLRA 251
EFECL+PPG+ YR+R +L +
Sbjct: 109 EFECLNPPGDKAVKLLEEYRQRLKLNS 135
>UniRef50_UPI00003BFD63 Cluster: PREDICTED: similar to CG32647-PA,
isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG32647-PA, isoform A - Apis mellifera
Length = 136
Score = 101 bits (242), Expect = 1e-20
Identities = 40/66 (60%), Positives = 47/66 (71%)
Frame = +3
Query: 6 MEEDCVDWEGKSVLHGLLYXXXXXXXXXXXXYHSEPMWCKAIYCDPPYFCKNFRVGERCC 185
+EE+C D++G V HGLLY YHSEPMWC++I+C PPY CK FRVGERCC
Sbjct: 33 LEENCTDFQGAIVRHGLLYVPGPAVCSLCVCYHSEPMWCQSIFCTPPYRCKKFRVGERCC 92
Query: 186 EFECLD 203
EFECLD
Sbjct: 93 EFECLD 98
>UniRef50_Q16UR5 Cluster: Type II collagen, putative; n=1; Aedes
aegypti|Rep: Type II collagen, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 122
Score = 53.2 bits (122), Expect = 5e-06
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 15 DCVDWEGKSVLHGLLYXXXXXXXXXXXXY-HSEPMWCKAIYCDPPYFCKNFRVGERCCEF 191
+C D GK V Y + P CKA+ C PP+ CK+F++G CCEF
Sbjct: 44 ECRDMNGKKVEQDAHYVPPGNDPCRLCLCDNGHPKACKAVLCTPPHDCKSFQIGSSCCEF 103
Query: 192 ECLD 203
CLD
Sbjct: 104 ICLD 107
>UniRef50_P98153 Cluster: Integral membrane protein DGCR2/IDD
precursor; n=31; Euteleostomi|Rep: Integral membrane
protein DGCR2/IDD precursor - Homo sapiens (Human)
Length = 550
Score = 42.3 bits (95), Expect = 0.009
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 12 EDCVDWEGKSVLHGLLYXXXXXXXXXXXXYHS-EPMWCKAIYCDPPYFCKNFRVGER-CC 185
+ CVD + V G + H EP C A C+ P C+ +R + CC
Sbjct: 269 QTCVDIKDNVVDEGFYFTPKGDDPCLSCTCHGGEPEMCVAALCERPQGCQQYRKDPKECC 328
Query: 186 EFECLDPPG 212
+F CLDP G
Sbjct: 329 KFMCLDPDG 337
>UniRef50_UPI00015B576D Cluster: PREDICTED: similar to type II
collagen, putative; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to type II collagen, putative -
Nasonia vitripennis
Length = 611
Score = 39.5 bits (88), Expect = 0.065
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 102 HSEPMWCKAIYCDPPYFCKNFRVGERCCEFECLD 203
+ P CKA+ C CK+FR G+ CCE CLD
Sbjct: 58 NGNPTLCKAVLCKD---CKSFRFGDTCCELICLD 88
>UniRef50_UPI0000DB7180 Cluster: PREDICTED: similar to CG4285-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG4285-PA
- Apis mellifera
Length = 592
Score = 39.5 bits (88), Expect = 0.065
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 18 CVDWEGKSVLHGLLYXXXXXXXXXXXXYHSEPMWCKAIYCD-PPYFCKNFRVGERCCEFE 194
C D +G+S + +Y + P WCKA+ C +CK+ R CC++
Sbjct: 31 CKDQQGRSYENTFIYIPGPEPCTLCVCDNGNPKWCKALVCKYAEEYCKSSR--HICCQYI 88
Query: 195 CLD 203
CLD
Sbjct: 89 CLD 91
>UniRef50_Q0KI70 Cluster: CG34128-PA; n=1; Drosophila
melanogaster|Rep: CG34128-PA - Drosophila melanogaster
(Fruit fly)
Length = 100
Score = 37.1 bits (82), Expect = 0.35
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Frame = +3
Query: 18 CVDWEGKSVLHGLLYXXXXXXXXXXXXYHSEPMWCKAIYCDPPYFCKNFRV---GERCCE 188
C D+ GK G+ Y P CK + C+ CK+F+ G CCE
Sbjct: 24 CRDYNGKMYETGMHYMPGPDSCRLCICDSGLPKACKMVLCEAFSKCKSFQTVGSGNNCCE 83
Query: 189 FECLDPPGED 218
CLD D
Sbjct: 84 VICLDDQFSD 93
>UniRef50_Q4S3L6 Cluster: Chromosome 1 SCAF14749, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF14749, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 813
Score = 35.5 bits (78), Expect = 1.1
Identities = 29/90 (32%), Positives = 39/90 (43%)
Frame = -3
Query: 279 AAEEFPANKGPGVSVAPGSECPLRVDLGTRIHSNVRQPESFCRSKAGRSI*LYTTSARSG 100
AAEE PA +G S A GS+ P R R+ S C +K G S
Sbjct: 500 AAEEEPAGRGLARSAAGGSQPPARTKTLVRVRPQRATDCSACHAKLG-----------SD 548
Query: 99 SRHRRSTRPVQARTRARGAPIFPPNRRSPL 10
++ R +P + R R GAP PP ++ L
Sbjct: 549 TKKRVPKKPRKRRGRKEGAP--PPQKQKDL 576
>UniRef50_Q9HFI9 Cluster: Putative uncharacterized protein
B2J23.130; n=3; cellular organisms|Rep: Putative
uncharacterized protein B2J23.130 - Neurospora crassa
Length = 859
Score = 35.5 bits (78), Expect = 1.1
Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Frame = -3
Query: 315 RPALKRSVGPRSAAEEFPANKGPGVSV-----APGSECPLRVDLGTRIHSNVRQPESFCR 151
RP L R+ P SA + KG S PG+ PL+ R +SN + P +
Sbjct: 36 RPYLSRAPLPGSARTTYQIAKGTTTSRQEGRGTPGAGGPLQTAASPRGNSNKQAPLAVAS 95
Query: 150 SKAGRSI*LYTTSARSGSRHRRSTRPVQARTRARGAPIFPPNRRSPLPCI 1
S+ T R+GS R+ R T AR P+ PN R+P P +
Sbjct: 96 SRYNSPSGCPTRQPRAGSGPTRTPR----TTSARADPLAKPN-RNPGPTV 140
>UniRef50_Q3JX98 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 567
Score = 35.1 bits (77), Expect = 1.4
Identities = 29/99 (29%), Positives = 38/99 (38%)
Frame = -3
Query: 315 RPALKRSVGPRSAAEEFPANKGPGVSVAPGSECPLRVDLGTRIHSNVRQPESFCRSKAGR 136
R A G RS A G + ECP R +R + R+ S CR+ GR
Sbjct: 470 RAAPAPRAGRRSIAARASRTSGAVRADERSPECPPRAPRASRARAR-RRATSGCRAPRGR 528
Query: 135 SI*LYTTSARSGSRHRRSTRPVQARTRARGAPIFPPNRR 19
++ + R R RR+ R RA AP P R
Sbjct: 529 AVADRASRIRRAPRARRAARRAPCGRRAPCAPCRPCRAR 567
>UniRef50_Q10A18 Cluster: Expressed protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice)
Length = 248
Score = 35.1 bits (77), Expect = 1.4
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -3
Query: 312 PALKRSVGPRSAAEEFPANKGPGVSVAPGSECPLR-VDLGTRI-HSNVRQPESFCRSK 145
P K + R+ AEE P + P S +P + PLR + LGT + S R+ FCR +
Sbjct: 72 PRCKEAARGRNQAEELPITRSPSSSSSPAAGSPLRFLVLGTTVGWSYRRRHTDFCRRR 129
>UniRef50_Q4WNW0 Cluster: Killer toxin sensitivity protein (IKI3),
putative; n=2; cellular organisms|Rep: Killer toxin
sensitivity protein (IKI3), putative - Aspergillus
fumigatus (Sartorya fumigata)
Length = 1239
Score = 34.7 bits (76), Expect = 1.9
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -3
Query: 216 PLRVDLGTRIHSNVRQPESFCRSKAGRSI*LYTTSARSGSRHRRSTRPVQARTRARG 46
P DLG I NV + + AGR++ T + SRH TR + R RARG
Sbjct: 1050 PTTDDLGVDIPDNVSLAPTDASTLAGRTMFTRYTGKTASSRHTSKTRRREERKRARG 1106
>UniRef50_O84843 Cluster: Phenylalanyl-tRNA synthetase alpha chain;
n=7; Chlamydiaceae|Rep: Phenylalanyl-tRNA synthetase
alpha chain - Chlamydia trachomatis
Length = 342
Score = 34.3 bits (75), Expect = 2.4
Identities = 32/106 (30%), Positives = 41/106 (38%)
Frame = -3
Query: 321 MDRPALKRSVGPRSAAEEFPANKGPGVSVAPGSECPLRVDLGTRIHSNVRQPESFCRSKA 142
+D + R+ + E NK P VAPG EC D+ R H Q E+FC K
Sbjct: 164 LDPTTVLRTHTSNVQSRELARNKPPVRIVAPG-ECFRNEDVSARSHVIFHQVEAFCVDKD 222
Query: 141 GRSI*LYTTSARSGSRHRRSTRPVQARTRARGAPIFPPNRRSPLPC 4
L TS +G H R V+ R R P P + C
Sbjct: 223 ISFSDL--TSMLAGFYHIFFGRKVELRFRHSYFPFVEPGIEVDISC 266
>UniRef50_A4S8R6 Cluster: Predicted protein; n=2; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 392
Score = 33.5 bits (73), Expect = 4.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 108 EPMWCKAIYCDPPYFCKNFRVGERCCEFECLD 203
E +W +A+ C+ P F K+ + E+C FE L+
Sbjct: 349 EDVWLRALACNRPAFAKDVSLDEKCRAFEALE 380
>UniRef50_Q3SY56 Cluster: Transcription factor Sp6; n=11;
Tetrapoda|Rep: Transcription factor Sp6 - Homo sapiens
(Human)
Length = 376
Score = 33.5 bits (73), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 197 PRSTRRGHSLPGATETPGPLLAGNSSAADLGPTLRFKAG 313
P T +GH+ P A + P PL G + LGP + F G
Sbjct: 28 PLQTYQGHTSPEAGDYPSPLQPGELQSLPLGPEVDFSQG 66
>UniRef50_Q97FQ7 Cluster: Glutamyl-tRNA(Gln) amidotransferase
subunit A 1; n=34; cellular organisms|Rep:
Glutamyl-tRNA(Gln) amidotransferase subunit A 1 -
Clostridium acetobutylicum
Length = 485
Score = 33.1 bits (72), Expect = 5.7
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 318 DRPALKRSVGPRSAAEEFPANKGPGVSVAPGS-ECPLRVDLGTRIHSNVRQPESFC 154
+ A K S P S E P G +VA S E P + LGT +VRQP SFC
Sbjct: 134 ENSAFKVSKNPWSL-ERVPGGSSGGSAVAVASLEAP--ISLGTETGGSVRQPASFC 186
>UniRef50_UPI0000E24C47 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 303
Score = 32.7 bits (71), Expect = 7.5
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -3
Query: 114 SARSGSRHRRSTRPVQAR---TRARGAPIFPPNRRSPLPC 4
+ R G RH R+ RP + R R+R AP P P+PC
Sbjct: 145 ATRRGGRHPRAPRPSRPRPRRARSRSAPKHPARIAEPVPC 184
>UniRef50_A6U977 Cluster: Putative uncharacterized protein; n=1;
Sinorhizobium medicae WSM419|Rep: Putative
uncharacterized protein - Sinorhizobium medicae WSM419
Length = 187
Score = 32.7 bits (71), Expect = 7.5
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 13 RTASIGRENRCSTGSCTCLDRACA--PSVSATTPSRCGVKLYTATRLTSA 156
R ++ RE CS G+C C R CA V + SR V L ++RL S+
Sbjct: 17 RWRTVRRERSCSVGACRCKGRGCARRALVLRSPGSRGWVVLVPSSRLCSS 66
>UniRef50_Q0UPD2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 739
Score = 32.7 bits (71), Expect = 7.5
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 150 FCKNFRVGERCCEFEC--LDPPGEDTRYRERQRLRALY*LETPQPLTSDPRFVSKRAYP 320
+C + GE+C C L PGED RQ L + ++T QP S+ + A+P
Sbjct: 179 YCSAYLRGEQCNNRNCMFLHEPGEDNDSFTRQDLSMMNSIQTQQPSQSNTSRAAPPAHP 237
>UniRef50_Q14847 Cluster: LIM and SH3 domain protein 1; n=44;
Euteleostomi|Rep: LIM and SH3 domain protein 1 - Homo
sapiens (Human)
Length = 261
Score = 32.7 bits (71), Expect = 7.5
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = -3
Query: 273 EEFPANKGPGVSVAPGSECPLRVDLGTRIHSNVRQPESFCRSKAGRS----I*LYTTSAR 106
EEF NKG G SV + R+ SN++ E F +S+ G S + ++
Sbjct: 88 EEFEKNKGKGFSVVADTPELQRIKKTQDQISNIKYHEEFEKSRMGPSGGEGMEPERRDSQ 147
Query: 105 SGSRHRRSTRPVQARTRARGAPIFPPNRRSPL 10
GS +RR Q AP++ ++ P+
Sbjct: 148 DGSSYRRPLEQQQPHHIPTSAPVYQQPQQQPV 179
>UniRef50_Q5SIY0 Cluster: Dihydroxy-acid dehydratase; n=7;
Bacteria|Rep: Dihydroxy-acid dehydratase - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 555
Score = 32.7 bits (71), Expect = 7.5
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 106 PSRCGVKLYTATRLTSA-KTFGLANVAVNSSA*IHPERTLATGSDRDSGPFISWKL 270
P CG + YTA + A + GL+ V N+ +HPE+ AT +++G ++W +
Sbjct: 188 PGACGGQ-YTANTMAMALEALGLSPVGYNAIPAVHPEKERAT---KEAGKILAWAI 239
>UniRef50_UPI0000D997E8 Cluster: PREDICTED: hypothetical protein;
n=2; Catarrhini|Rep: PREDICTED: hypothetical protein -
Macaca mulatta
Length = 192
Score = 32.3 bits (70), Expect = 9.9
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -3
Query: 192 RIHSNVRQPESFCRSKAGRSI*LYTTSARSGSRHRRSTRPVQARTRARGAPIFPPNRRSP 13
R H +V + ++ AGR+ L+ +A G + + P TRA AP PP +R+P
Sbjct: 103 RKHGSVTRTKAAVSLPAGRTPGLFGRAAPPGGPAKEHSAPQAPETRAEDAPGVPP-QRAP 161
Query: 12 LP 7
P
Sbjct: 162 HP 163
>UniRef50_A2VUD4 Cluster: Helix-turn-helix protein; n=1;
Burkholderia cenocepacia PC184|Rep: Helix-turn-helix
protein - Burkholderia cenocepacia PC184
Length = 187
Score = 32.3 bits (70), Expect = 9.9
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = -3
Query: 264 PANKGPGVSV-APGSECPLRVDLGTRIHSNVRQPESFCRSKAGRSI*LYTTSAR---SGS 97
P + P +V A G+ V LG R R +S CR+ GR + + SAR
Sbjct: 22 PRERRPCAAVRADGAALQGAVRLGARAALLQRARDSGCRAGRGRRVSPHRRSARRCGPAH 81
Query: 96 RHRRSTRPVQARTRARG 46
RH ST+ + R R RG
Sbjct: 82 RHETSTQALPDRDRRRG 98
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,809,047
Number of Sequences: 1657284
Number of extensions: 12622594
Number of successful extensions: 36078
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 34350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36056
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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