Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0278
         (629 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69361-1|CAE17943.1|  468|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z50863-5|CAA90738.2|  746|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z49153-2|CAA89023.2|  746|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical...    28   4.8  

>Z69361-1|CAE17943.1|  468|Caenorhabditis elegans Hypothetical
           protein T13H10.2 protein.
          Length = 468

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 293 WVRGQRLRSFQLIKGPESLSLPVASVLSGWI*ALEFTATFANPKVFA-EVRRVAVYSFTP 117
           W+  +    F + +    + LP++S L     A EFT  F  P+V   ++    V   T 
Sbjct: 270 WLMHKNRAKFMIFQNSAEIVLPISSTLENPNYASEFTRIFETPRVEGYDILEYNVKISTD 329

Query: 116 HRLGVVAD 93
            RLG  +D
Sbjct: 330 KRLGDFSD 337


>Z50863-5|CAA90738.2|  746|Caenorhabditis elegans Hypothetical
           protein C14H10.2a protein.
          Length = 746

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = -3

Query: 588 SPERINEYLYWRNTIFFFNKIKTI--TTAHRKKKRYSLL 478
           SPE++ E   +RN +  ++K  T   ++A+ K KRY +L
Sbjct: 187 SPEKLEELSRYRNKVLEYSKCITALRSSAYEKDKRYEML 225


>Z49153-2|CAA89023.2|  746|Caenorhabditis elegans Hypothetical
           protein C14H10.2a protein.
          Length = 746

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = -3

Query: 588 SPERINEYLYWRNTIFFFNKIKTI--TTAHRKKKRYSLL 478
           SPE++ E   +RN +  ++K  T   ++A+ K KRY +L
Sbjct: 187 SPEKLEELSRYRNKVLEYSKCITALRSSAYEKDKRYEML 225


>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
            protein Y75B8A.13 protein.
          Length = 1420

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 120  TTSARSGSRHRRSTRPVQARTRARGAPIFPPNRRSPLP 7
            ++S   GS  ++   P++A T A  AP  PPN+ S  P
Sbjct: 898  SSSEAPGSPRQQDPEPIEAFTEASEAPPPPPNQGSEDP 935


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,302,866
Number of Sequences: 27780
Number of extensions: 300378
Number of successful extensions: 869
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)