Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0276
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53180-5|AAA96287.3| 295|Caenorhabditis elegans Hypothetical pr... 89 3e-18
AL132898-17|CAB60957.2| 299|Caenorhabditis elegans Hypothetical... 30 1.7
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr... 30 2.2
U23510-14|AAO38611.1| 199|Caenorhabditis elegans Hypothetical p... 30 2.2
U23510-13|AAK71392.2| 425|Caenorhabditis elegans Hypothetical p... 30 2.2
AC024776-9|AAK68462.1| 244|Caenorhabditis elegans Set (trithora... 29 3.8
AF106581-5|AAC78210.1| 588|Caenorhabditis elegans Hypothetical ... 29 5.0
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 28 6.7
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 28 6.7
Z48006-1|CAA88047.1| 642|Caenorhabditis elegans Hypothetical pr... 28 8.8
>U53180-5|AAA96287.3| 295|Caenorhabditis elegans Hypothetical
protein D1014.3 protein.
Length = 295
Score = 89.0 bits (211), Expect = 3e-18
Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +1
Query: 256 AKKWPQAGQAFCNAAQLHLKAG-VRHDAATNFVDASNCYKKCDANEAVSCLLKAIEIYTD 432
AK W AG AF AA+ + K G +HD AT + +A+NC++K AV CL K EIYTD
Sbjct: 53 AKNWQAAGDAFLEAAEFYAKNGDSKHDCATQYAEAANCFRKIQPERAVQCLEKTSEIYTD 112
Query: 433 MGRFTVAAKQHQNIAE 480
MGRFT+AAK H +IAE
Sbjct: 113 MGRFTMAAKNHVSIAE 128
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = +2
Query: 509 RAMQHYEQAADYFRGEESTSSANKCMLKLAQYAAQLEHYDKGHTDLRADRXXXXXXXXXX 688
+ ++HY+QAADY++GEE SSA+KC++K+A Y+A+LE Y +
Sbjct: 139 QCVKHYQQAADYYKGEEQKSSASKCLVKVAMYSAELEKYSQAIAVFEEIAFFEADHSTLK 198
Query: 689 XXCEGVHVSEAALCH 733
+G H +A LCH
Sbjct: 199 YAAKG-HFFQALLCH 212
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 630 RAIQIYEQIAKSSLDNSLLKYSAKEYMFPKPPCATVRRHTERANALEKYSSLYP 791
+AI ++E+IA D+S LKY+AK + F C AL+KY + P
Sbjct: 179 QAIAVFEEIAFFEADHSTLKYAAKGHFFQALLCHLCIDPINTQQALQKYENASP 232
>AL132898-17|CAB60957.2| 299|Caenorhabditis elegans Hypothetical
protein Y59A8B.8 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +1
Query: 247 IQEAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVD-ASNCYKKC-DANEAVSCLLKAIE 420
++EA + + + + + LK D A + ++ AS CY+ D +A LLKA E
Sbjct: 7 LKEAAECERKAEDCMKTSMIKLKFKPDFDGAASAMERASVCYRNAQDPKKAAGSLLKAAE 66
Query: 421 IYTDMGRFTVAAKQHQNIAECTR 489
Y AAK + A R
Sbjct: 67 YYEQNRNLFHAAKAREGAAMLLR 89
>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical protein
C25H3.8 protein.
Length = 2148
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +1
Query: 250 QEAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVDASNCYKKC 378
QEA KW AGQ + H KA RH +F D NC K C
Sbjct: 1141 QEAVKWEAAGQ-----MEEHEKAKDRHPLMFSFAD-ENCPKAC 1177
>U23510-14|AAO38611.1| 199|Caenorhabditis elegans Hypothetical
protein R12C12.8b protein.
Length = 199
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +1
Query: 250 QEAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVDASNCYKKC 378
QEA KW AGQ + H KA RH +F D NC K C
Sbjct: 94 QEAVKWEAAGQ-----MEEHEKAKDRHPLMFSFAD-ENCPKAC 130
>U23510-13|AAK71392.2| 425|Caenorhabditis elegans Hypothetical
protein R12C12.8a protein.
Length = 425
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +1
Query: 250 QEAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVDASNCYKKC 378
QEA KW AGQ + H KA RH +F D NC K C
Sbjct: 320 QEAVKWEAAGQ-----MEEHEKAKDRHPLMFSFAD-ENCPKAC 356
>AC024776-9|AAK68462.1| 244|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 23,
isoform a protein.
Length = 244
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 319 GVRHDAATNFVDASNCYKKCDANEAVSCLLKAIEIYTDMGRFTVAAKQHQNIAECTRRSA 498
G+ + + NC +C + SCL+ I+ YT G+ K + + EC+ + A
Sbjct: 14 GISETDWNDVFEGCNCEAECSSAAGCSCLINKIDNYTVDGKIN---KSSELLIECSDQCA 70
>AF106581-5|AAC78210.1| 588|Caenorhabditis elegans Hypothetical
protein VC5.2 protein.
Length = 588
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +1
Query: 688 STVRRSTCFRS---RPVPLCVDILNAQTPSRSTVL 783
S VRRST R P PL D+L+ QTP VL
Sbjct: 167 SRVRRSTMSRKIAREPTPLTPDMLSWQTPRHKNVL 201
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical protein
Y37A1B.17b protein.
Length = 1467
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 779 TVLLEGVCAFSMSTHSGTGRLRKHVLLRTVLEQAVVQGRLGDLLV 645
T +L + S STH R + T+LE+A +GRLGD+ V
Sbjct: 958 TEILPTITEGSTSTHKF--RNQNATERNTILEKATAKGRLGDIFV 1000
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 779 TVLLEGVCAFSMSTHSGTGRLRKHVLLRTVLEQAVVQGRLGDLLV 645
T +L + S STH R + T+LE+A +GRLGD+ V
Sbjct: 958 TEILPTITEGSTSTHKF--RNQNATERNTILEKATAKGRLGDIFV 1000
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 779 TVLLEGVCAFSMSTHSGTGRLRKHVLLRTVLEQAVVQGRLGDLLV 645
T +L + S STH R + T+LE+A +GRLGD+ V
Sbjct: 958 TEILPTITEGSTSTHKF--RNQNATERNTILEKATAKGRLGDIFV 1000
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 779 TVLLEGVCAFSMSTHSGTGRLRKHVLLRTVLEQAVVQGRLGDLLV 645
T +L + S STH R + T+LE+A +GRLGD+ V
Sbjct: 958 TEILPTITEGSTSTHKF--RNQNATERNTILEKATAKGRLGDIFV 1000
>Z48006-1|CAA88047.1| 642|Caenorhabditis elegans Hypothetical
protein F19C6.1 protein.
Length = 642
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 420 DLHRYGSFHCGCQTTPEHCGVYETEC 497
D YG F+ GC + P + ETEC
Sbjct: 526 DTQFYGKFNTGCVSIPWQSEMIETEC 551
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,311,869
Number of Sequences: 27780
Number of extensions: 269054
Number of successful extensions: 766
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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