Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0275
         (804 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0128 - 6890918-6891900,6892929-6893124                           34   0.15 
05_02_0131 - 6919143-6920125,6920334-6920529                           33   0.35 
07_01_0018 + 121378-122130                                             32   0.46 
11_06_0295 + 22033367-22034947,22035030-22035137,22035230-220353...    30   2.5  
03_01_0056 - 471338-471919,472013-472213                               30   2.5  
10_08_0851 - 21065832-21065948,21066361-21066705,21067181-210674...    29   5.7  
02_05_1263 + 35316083-35316185,35317167-35317220,35317665-353179...    28   7.6  
02_04_0009 - 18865087-18866249,18866357-18866471,18866555-188666...    28   10.0 

>05_02_0128 - 6890918-6891900,6892929-6893124
          Length = 392

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +1

Query: 112 HPYSRTAILSI-KGLPTNLVYNPANQDLLFTLIDLETLQDDNIQTKMDHIYFERGIRSKS 288
           H     A+L+I    PTN+VY     D  F L + E L +  ++ KM  I    GI  + 
Sbjct: 18  HAEGPAAVLAIGTANPTNIVYQDGFTDYYFGLTESEHLTE--LKDKMKRICHRSGIEKRY 75

Query: 289 ITLEVKLQR 315
           I L+ KL R
Sbjct: 76  IHLDEKLIR 84


>05_02_0131 - 6919143-6920125,6920334-6920529
          Length = 392

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +1

Query: 112 HPYSRTAILSI-KGLPTNLVYNPANQDLLFTLIDLETLQDDNIQTKMDHIYFERGIRSKS 288
           H     A+L+I    PTN+VY     D  F L   E L +  ++ KM  I    GI  + 
Sbjct: 18  HAEGPAAVLAIGTANPTNIVYQDGFADYYFGLTKSEHLTE--LKDKMKRICHRSGIEKRY 75

Query: 289 ITLEVKLQR 315
           I L+ KL R
Sbjct: 76  IHLDEKLIR 84


>07_01_0018 + 121378-122130
          Length = 250

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -3

Query: 694 SPNXIYSYSFSGILSDTNKFNGLLKAFEQNFNIFGITFVKYIIFVIYAQIESAGNVF 524
           SP  +YS +F G +  T+   G+L     +F +F  T +KY+   + A  +  G  F
Sbjct: 80  SPLYVYSTTFDGGIRHTDDLLGVLSLIIYSFLLF--TIIKYVYIALRANDDGDGGTF 134


>11_06_0295 +
           22033367-22034947,22035030-22035137,22035230-22035370,
           22035576-22035625,22036100-22036168,22036649-22036781,
           22037634-22037747,22037826-22038038,22038387-22038500,
           22038768-22038900,22039304-22039416,22040204-22040284,
           22040397-22040483
          Length = 978

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -3

Query: 163 NLLVGL*WIIWLFLSKDDHRNRRSSSWMPQLRPQ 62
           NLL G    I L+LS D H   RSS  +  ++PQ
Sbjct: 635 NLLTGKKRFILLYLSSDFHAENRSSGTIVDMKPQ 668


>03_01_0056 - 471338-471919,472013-472213
          Length = 260

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
 Frame = +3

Query: 456 YAVLF-PENAVYIID---IKKKKRGKSNTFPALSIWA 554
           YA+L+ P++ V+++D   +++  R   NTFP   +WA
Sbjct: 130 YAILWNPDHIVFLVDDVPVRRYPRAAGNTFPDRQMWA 166


>10_08_0851 -
           21065832-21065948,21066361-21066705,21067181-21067489,
           21067574-21067648,21067754-21067917,21067994-21068432
          Length = 482

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 608 LLKGFQEPIEFVGIAKNSGKAIAVDGIGRVILGCDR 715
           +L   + P  F+ I   SGKA   DG+ R +LG ++
Sbjct: 313 VLGDMEVPDSFMAILPKSGKASVGDGVYRAMLGAEK 348


>02_05_1263 +
           35316083-35316185,35317167-35317220,35317665-35317903,
           35317989-35318089,35318390-35318583,35318885-35319003,
           35319624-35319749,35320081-35320142,35320265-35320348,
           35320580-35320664
          Length = 388

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/51 (21%), Positives = 24/51 (47%)
 Frame = -1

Query: 747 HVVWSQMVPNRRSQPNITLPXPSTAIAFPEFLAIPTNSMGS*KPLSKTLTY 595
           +++ S++  +    PN++ P P   + FP +  +P   M    P +  + Y
Sbjct: 207 YLILSKLSEDVHYPPNLSSPFPYAGLGFPSYPGVPVGYMIPQVPYNNAVNY 257


>02_04_0009 -
           18865087-18866249,18866357-18866471,18866555-18866607,
           18866703-18866963,18867100-18867150,18867255-18867503,
           18867634-18867856,18867958-18868071
          Length = 742

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -3

Query: 694 SPNXIYSYSFSGILSDTNKFNGLLKAFEQNFNIFGITFVKYIIFVIYAQIESAGNVF 524
           SP  +YS +F   +   +   G+L      + +  I  VKY+  V+YA     G  F
Sbjct: 62  SPLYVYSSTFPNGIKHPDDLVGVLSLIL--YTLILIPMVKYVFIVLYANDNGDGGTF 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,456,883
Number of Sequences: 37544
Number of extensions: 483777
Number of successful extensions: 1331
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)