Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0275
         (804 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    25   0.82 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   3.3  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   4.4  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    23   4.4  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   4.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.7  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 580 VKYIIFVIYAQIESAGNVFDFPLFFF 503
           +KYI F  +  IE   NV DF  +F+
Sbjct: 7   IKYINFDRFFFIEGMTNVLDFDYYFY 32


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 591 PNMLKFCSKAFKSPLNLLVSLRIPEK 668
           P   ++CSK+F    NL V  RI  K
Sbjct: 119 PYQCEYCSKSFSVKENLSVHRRIHTK 144



 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 504 FLCRLCKQRFLETKQRTIHLR 442
           ++C+ C + F  +KQ  +H R
Sbjct: 204 YVCKACGKGFTCSKQLKVHTR 224


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 714 DGLVPSATRQRDSRTKRLELGFYPSGY 794
           D +    TR +DSR+K + L  YP  Y
Sbjct: 128 DEIKKKTTRFQDSRSKDVYLIDYPEDY 154


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 714 DGLVPSATRQRDSRTKRLELGFYPSGY 794
           D +    TR +DSR+K + L  YP  Y
Sbjct: 128 DEIKKKTTRFQDSRSKDVYLIDYPEDY 154


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 714 DGLVPSATRQRDSRTKRLELGFYPSGY 794
           D +    TR +DSR+K + L  YP  Y
Sbjct: 128 DEIKKKTTRFQDSRSKDVYLIDYPEDY 154


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 700  IGLRPTVWYHLR 735
            + L P  WYHLR
Sbjct: 1522 LDLVPATWYHLR 1533


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,949
Number of Sequences: 438
Number of extensions: 5639
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)