Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0274
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.6  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   3.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.3  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   6.3  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 729 KIGHTPNFGMEKNGN 773
           + GHTPN  +++ GN
Sbjct: 308 RYGHTPNVVLDEEGN 322


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +3

Query: 621 FYA*LYVIK*VSIVFLK*LIKSKKQKWAKFNP 716
           F++ LY +  + I + + ++K K Q W +F+P
Sbjct: 148 FFSALYSLP-ILIFYEEKIVKGKLQCWIEFHP 178


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 348 FNKLY**MICSGLYSGINPLTVDTFRNRTRTG 253
           +N LY   I   L S INP+  +   ++ RTG
Sbjct: 330 YNILYFCRIMVYLNSAINPILYNLMSSKFRTG 361


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 731  DWPYPKFW 754
            DW YPK W
Sbjct: 1518 DWEYPKCW 1525



 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 731  DWPYPKFW 754
            DW YPK W
Sbjct: 1943 DWEYPKCW 1950



 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 731  DWPYPKFW 754
            DW YPK W
Sbjct: 2441 DWEYPKCW 2448


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 702 AKFNPSLVGKIGHTPNFGMEKN 767
           AKFN S     G +P F  E+N
Sbjct: 109 AKFNESKWQDSGESPGFTTERN 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,778
Number of Sequences: 336
Number of extensions: 4116
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)